Image-based profiling for drug discovery: due for a machine-learning upgrade?

SN Chandrasekaran, H Ceulemans, JD Boyd… - Nature Reviews Drug …, 2021 - nature.com
Image-based profiling is a maturing strategy by which the rich information present in
biological images is reduced to a multidimensional profile, a collection of extracted image …

Application of CRISPR/Cas9 to human-induced pluripotent stem cells: from gene editing to drug discovery

C De Masi, P Spitalieri, M Murdocca, G Novelli… - Human genomics, 2020 - Springer
Human-induced pluripotent stem cells (hiPSCs) and CRISPR/Cas9 gene editing system
represent two instruments of basic and translational research, which both allow to acquire …

Natural product fragment combination to performance-diverse pseudo-natural products

M Grigalunas, A Burhop, S Zinken, A Pahl… - Nature …, 2021 - nature.com
Natural product structure and fragment-based compound development inspire pseudo-
natural product design through different combinations of a given natural product fragment …

[HTML][HTML] Entrectinib, a new multi-target inhibitor for cancer therapy

Q Jiang, M Li, H Li, L Chen - Biomedicine & Pharmacotherapy, 2022 - Elsevier
Clinical practice shows that when single-target drugs treat multi-factor diseases such as
tumors, cardiovascular system and endocrine system diseases, it is often difficult to achieve …

Chemoproteomics and chemical probes for target discovery

G Drewes, S Knapp - Trends in biotechnology, 2018 - cell.com
Chemical probes represent versatile tools to validate disease-modifying targets. However,
evaluating the selectivity of chemical probes in complex cellular systems is a major …

Tetrazole‐based probes for integrated phenotypic screening, Affinity‐Based proteome profiling, and sensitive detection of a cancer biomarker

K Cheng, JS Lee, P Hao, SQ Yao, K Ding… - Angewandte …, 2017 - Wiley Online Library
Target‐identification phenotypic screening has been a powerful approach in drug discovery;
however, it is hindered by difficulties in identifying the underlying cellular targets. To address …

Discovery of novel diaryl-substituted fused heterocycles targeting katanin and tubulin with potent antitumor and antimultidrug resistance efficacy

F Jiang, M Yu, Y Liang, K Ding… - Journal of Medicinal …, 2024 - ACS Publications
Disrupting microtubule dynamics has emerged as a promising strategy for cancer treatment.
However, drug resistance remains a challenge hindering the development of microtubule …

High-content phenotypic and pathway profiling to advance drug discovery in diseases of unmet need

RE Hughes, RJR Elliott, JC Dawson, NO Carragher - Cell chemical biology, 2021 - cell.com
Conventional thinking in modern drug discovery postulates that the design of highly
selective molecules which act on a single disease-associated target will yield safer and …

Exploring gene knockout strategies to identify potential drug targets using genome-scale metabolic models

A Paul, R Anand, SP Karmakar, S Rawat, N Bairagi… - Scientific reports, 2021 - nature.com
Research on new cancer drugs is performed either through gene knockout studies or
phenotypic screening of drugs in cancer cell-lines. Both of these approaches are costly and …

Predicting compound activity from phenotypic profiles and chemical structures

N Moshkov, T Becker, K Yang, P Horvath… - Nature …, 2023 - nature.com
Predicting assay results for compounds virtually using chemical structures and phenotypic
profiles has the potential to reduce the time and resources of screens for drug discovery …