Integrative approaches for species delimitation in Ascomycota

SSN Maharachchikumbura, Y Chen, HA Ariyawansa… - Fungal Diversity, 2021 - Springer
Biodiversity loss from disturbances caused by human activities means that species are
disappearing at an ever increasing rate. The high number of species that have yet to be …

Incomplete estimates of genetic diversity within species: Implications for DNA barcoding

JD Phillips, DJ Gillis, RH Hanner - Ecology and Evolution, 2019 - Wiley Online Library
DNA barcoding has greatly accelerated the pace of specimen identification to the species
level, as well as species delineation. Whereas the application of DNA barcoding to the …

tcsBU: a tool to extend TCS network layout and visualization

A Múrias dos Santos, MP Cabezas, AI Tavares… - …, 2016 - academic.oup.com
Motivation: TCS is a widely used haplotype network reconstruction software, but lacks the
capability of overlap** genetic with geographic structure, which is often a first step in …

DNA-based species delimitation in algae

F Leliaert, H Verbruggen… - European journal of …, 2014 - Taylor & Francis
Given the problems of species delimitation in algae using morphology or sexual
compatibility, molecular data are becoming the standard for delimiting species and testing …

A tri-oceanic perspective: DNA barcoding reveals geographic structure and cryptic diversity in Canadian polychaetes

CM Carr, SM Hardy, TM Brown, TA Macdonald… - PLoS one, 2011 - journals.plos.org
Background Although polychaetes are one of the dominant taxa in marine communities,
their distributions and taxonomic diversity are poorly understood. Recent studies have …

Rarity and incomplete sampling in DNA-based species delimitation

D Ahrens, T Fujisawa, HJ Krammer, J Eberle… - Systematic …, 2016 - academic.oup.com
DNA-based species delimitation may be compromised by limited sampling effort and
species rarity, including “singleton” representatives of species, which hampers estimates of …

Southern Ocean diversity: new paradigms from molecular ecology

AL Allcock, JM Strugnell - Trends in ecology & evolution, 2012 - cell.com
Southern Ocean biodiversity reflects past climate, oceanographic, and tectonic changes.
Molecular data from contemporary populations carry signatures of these processes. Here …

DNA barcoding: a six-question tour to improve users' awareness about the method

M Casiraghi, M Labra, E Ferri… - Briefings in …, 2010 - academic.oup.com
DNA barcoding is a recent and widely used molecular-based identification system that aims
to identify biological specimens, and to assign them to a given species. However, DNA …

Evidence for common horizontal transmission of Wolbachia among butterflies and moths

MZ Ahmed, JW Breinholt, AY Kawahara - BMC evolutionary biology, 2016 - Springer
Background Wolbachia is one of the most widespread bacteria on Earth. Previous research
on Wolbachia-host interactions indicates that the bacterium is typically transferred vertically …

Barcoding against a paradox? Combined molecular species delineations reveal multiple cryptic lineages in elusive meiofaunal sea slugs

KM Jörger, JL Norenburg, NG Wilson… - BMC evolutionary biology, 2012 - Springer
Background Many marine meiofaunal species are reported to have wide distributions, which
creates a paradox considering their hypothesized low dispersal abilities. Correlated with this …