The Phylogeny, Biodiversity, and Ecology of the Chloroflexi in Activated Sludge

LBM Speirs, DTF Rice, S Petrovski… - Frontiers in …, 2019 - frontiersin.org
It is now clear that several of the filamentous bacteria in activated sludge wastewater
treatment plants globally, are members of the phylum Chloroflexi. They appear to be more …

[HTML][HTML] Re-evaluating the microbiology of the enhanced biological phosphorus removal process

PH Nielsen, SJ McIlroy, M Albertsen… - Current opinion in …, 2019 - Elsevier
Highlights•Among PAOs, the genera Tetrasphaera and Ca. Accumulibacter are both
important in full-scale plants.•GAOs do not appear to be a real problem in full-scale EBPR …

Metagenomic analysis further extends the role of Chloroflexi in fundamental biogeochemical cycles

MPN Rao, ZH Luo, ZY Dong, Q Li, BB Liu, SX Guo… - Environmental …, 2022 - Elsevier
Chloroflexi members are ubiquitous and have been extensively studied; however, the
evolution and metabolic pathways of Chloroflexi members have long been debated. In the …

Genome-centric metagenomic insights into the role of Chloroflexi in anammox, activated sludge and methanogenic reactors

P Bovio-Winkler, LD Guerrero, L Erijman, P Oyarzúa… - BMC microbiology, 2023 - Springer
Abstract Background The phylum Chloroflexi is highly abundant in a wide variety of
wastewater treatment bioreactors. It has been suggested that they play relevant roles in …

Metagenomic analysis reveals microbial metabolic potentials alterations under antibiotic stress during sludge anaerobic digestion

Y **ang, W **ong, R Xu, Z Yang, Y Zhang, M Jia… - Journal of …, 2023 - Elsevier
The presence of antibiotics in sludge is considered to have a detrimental effect on methane
production and microbial community. However, the underlying mechanism of how antibiotic …

A review of filamentous sludge bulking controls from conventional methods to emerging quorum quenching strategies

X Lu, G Yan, L Fu, B Cui, J Wang, D Zhou - Water Research, 2023 - Elsevier
Filamentous bulking, which results from the overgrowth of filamentous microorganisms, is a
common issue that frequently disrupts the stable operation of activated sludge processes …

In-situ production of lactate driving the biotransformation of waste activated sludge to medium-chain fatty acid

SL Wu, W Wei, HH Ngo, W Guo, C Wang… - Journal of …, 2023 - Elsevier
Medium-chain fatty acids (MCFAs) have drawn great attention due to their high energy
density and superior hydrophobicity. Waste activated sludge (WAS) has been documented …

Generation of comprehensive ecosystem-specific reference databases with species-level resolution by high-throughput full-length 16S rRNA gene sequencing and …

MS Dueholm, KS Andersen, SJ McIlroy, JM Kristensen… - MBio, 2020 - Am Soc Microbiol
High-throughput 16S rRNA gene amplicon sequencing is an essential method for studying
the diversity and dynamics of microbial communities. However, this method is presently …

Lists of names of prokaryotic Candidatus taxa

A Oren, GM Garrity, CT Parker, M Chuvochina… - 2020 - microbiologyresearch.org
We here present annotated lists of names of Candidatus taxa of prokaryotes with ranks
between subspecies and class, proposed between the mid-1990s, when the provisional …

Proposal of names for 329 higher rank taxa defined in the Genome Taxonomy Database under two prokaryotic codes

M Chuvochina, AJ Mussig, PA Chaumeil… - FEMS Microbiology …, 2023 - academic.oup.com
Abstract The Genome Taxonomy Database (GTDB) is a taxonomic framework that defines
prokaryotic taxa as monophyletic groups in concatenated protein reference trees according …