Emerging technologies revolutionise insect ecology and monitoring

R Van Klink, T August, Y Bas, P Bodesheim… - Trends in ecology & …, 2022 - cell.com
Insects are the most diverse group of animals on Earth, but their small size and high diversity
have always made them challenging to study. Recent technological advances have the …

Fishing for fish environmental DNA: Ecological applications, methodological considerations, surveying designs, and ways forward

M Yao, S Zhang, Q Lu, X Chen, SY Zhang… - Molecular …, 2022 - Wiley Online Library
Vast global declines of freshwater and marine fish diversity and population abundance pose
serious threats to both ecosystem sustainability and human livelihoods. Environmental DNA …

[HTML][HTML] Environmental DNA metabarcoding for benthic monitoring: A review of sediment sampling and DNA extraction methods

J Pawlowski, K Bruce, K Panksep, FI Aguirre… - Science of the Total …, 2022 - Elsevier
Environmental DNA (eDNA) metabarcoding (parallel sequencing of DNA/RNA for
identification of whole communities within a targeted group) is revolutionizing the field of …

[HTML][HTML] Honey bees as biomonitors of environmental contaminants, pathogens, and climate change

MM Cunningham, L Tran, CG McKee, RO Polo… - Ecological …, 2022 - Elsevier
Monitoring the environment for pollution, pesticides, and pathogens is crucial for protecting
human, agriculture, and overall ecosystem health. Diverse strategies ranging from physical …

Navigating the seven challenges of taxonomic reference databases in metabarcoding analyses

F Keck, M Couton, F Altermatt - Molecular Ecology Resources, 2023 - Wiley Online Library
Assessment of biodiversity using metabarcoding data, such as from bulk or environmental
DNA sampling, is becoming increasingly relevant in ecology, biodiversity sciences and …

Plant pangenomes for crop improvement, biodiversity and evolution

M Schreiber, M Jayakodi, N Stein… - Nature Reviews Genetics, 2024 - nature.com
Plant genome sequences catalogue genes and the genetic elements that regulate their
expression. Such inventories further research aims as diverse as map** the molecular …

[HTML][HTML] Expanding ecological assessment by integrating microorganisms into routine freshwater biomonitoring

M Sagova-Mareckova, J Boenigk, A Bouchez… - Water research, 2021 - Elsevier
Bioindication has become an indispensable part of water quality monitoring in most
countries of the world, with the presence and abundance of bioindicator taxa, mostly …

An integrated spatio-temporal view of riverine biodiversity using environmental DNA metabarcoding

WB Perry, M Seymour, L Orsini, IB Jâms… - Nature …, 2024 - nature.com
Anthropogenically forced changes in global freshwater biodiversity demand more efficient
monitoring approaches. Consequently, environmental DNA (eDNA) analysis is enabling …

Flushing away the future: The effects of wastewater treatment plants on aquatic invertebrates

D Enns, S Cunze, NJ Baker, J Oehlmann, J Jourdan - Water Research, 2023 - Elsevier
Wastewater treatment plants (WWTP) are essential infrastructure in our develo** world.
However, with the development and release of novel entities and without modern upgrades …

Environmental DNA for biomonitoring

J Pawlowski, A Bonin, F Boyer, T Cordier… - Molecular …, 2021 - pmc.ncbi.nlm.nih.gov
The second series of papers concerns the use of eDNA to monitor fish diversity. We focus on
fish because they are among the most important groups of bioindicators and also because …