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Scientific large language models: A survey on biological & chemical domains
Large Language Models (LLMs) have emerged as a transformative power in enhancing
natural language comprehension, representing a significant stride toward artificial general …
natural language comprehension, representing a significant stride toward artificial general …
[HTML][HTML] Teaching AI to speak protein
M Heinzinger, B Rost - Current Opinion in Structural Biology, 2025 - Elsevier
Highlights•Protein Language Models (pLMs) tap into large unlabeled data to transform
protein science.•pLMs boost protein structure and function prediction performance and …
protein science.•pLMs boost protein structure and function prediction performance and …
Sequence modeling and design from molecular to genome scale with Evo
The genome is a sequence that encodes the DNA, RNA, and proteins that orchestrate an
organism's function. We present Evo, a long-context genomic foundation model with a …
organism's function. We present Evo, a long-context genomic foundation model with a …
[HTML][HTML] Are protein language models the new universal key?
Protein language models (pLMs) capture some aspects of the grammar of the language of
life as written in protein sequences. The so-called pLM embeddings implicitly contain this …
life as written in protein sequences. The so-called pLM embeddings implicitly contain this …
Multimodal AI/ML for discovering novel biomarkers and predicting disease using multi-omics profiles of patients with cardiovascular diseases
Cardiovascular diseases (CVDs) are complex, multifactorial conditions that require
personalized assessment and treatment. Advancements in multi-omics technologies …
personalized assessment and treatment. Advancements in multi-omics technologies …
A long-context language model for deciphering and generating bacteriophage genomes
B Shao, J Yan - Nature Communications, 2024 - nature.com
Inspired by the success of large language models (LLMs), we develop a long-context
generative model for genomes. Our multiscale transformer model, megaDNA, is pre-trained …
generative model for genomes. Our multiscale transformer model, megaDNA, is pre-trained …
Artificial intelligence for omics data analysis
Recent technological advancements have vastly improved access to high-throughput
biological instrumentation, sparking an unparalleled surge in omics data generation. The …
biological instrumentation, sparking an unparalleled surge in omics data generation. The …
Learning the language of DNA
CV Theodoris - Science, 2024 - science.org
With a vocabulary of just four nucleotides, the language of DNA encodes the fundamental
information needed to orchestrate all layers of regulation in a cell, from DNA to RNA and …
information needed to orchestrate all layers of regulation in a cell, from DNA to RNA and …
Programmable biology through artificial intelligence: from nucleic acids to proteins to cells
Programmable biology through artificial intelligence: from nucleic acids to proteins to cells |
Nature Methods Skip to main content Thank you for visiting nature.com. You are using a browser …
Nature Methods Skip to main content Thank you for visiting nature.com. You are using a browser …
Improving viral annotation with artificial intelligence
ABSTRACT Viruses of bacteria,“phages,” are fundamental, poorly understood components
of microbial community structure and function. Additionally, their dependence on hosts for …
of microbial community structure and function. Additionally, their dependence on hosts for …