[HTML][HTML] DNA barcode reference libraries for the monitoring of aquatic biota in Europe: Gap-analysis and recommendations for future work

H Weigand, AJ Beermann, F Čiampor, FO Costa… - Science of the Total …, 2019 - Elsevier
Effective identification of species using short DNA fragments (DNA barcoding and DNA
metabarcoding) requires reliable sequence reference libraries of known taxa. Both …

[HTML][HTML] Methodology for fish biodiversity monitoring with environmental DNA metabarcoding: The primers, databases and bioinformatic pipelines

F **ong, L Shu, H Zeng, X Gan, S He, Z Peng - Water Biology and Security, 2022 - Elsevier
Environmental DNA (eDNA) originates from cellular material shed by organisms into aquatic
or terrestrial environments and can be sampled and monitored using metabarcoding …

Phylogenetic classification of living and fossil ray-finned fishes (Actinopterygii)

TJ Near, CE Thacker - Bulletin of the Peabody Museum of Natural History, 2024 - BioOne
Classification of the tremendous diversity of ray-finned fishes (Actinopterygii) began with the
designation of taxonomic groups on the basis of morphological similarity. Starting in the late …

Metabarcoding a diverse arthropod mock community

TWA Braukmann, NV Ivanova… - Molecular ecology …, 2019 - Wiley Online Library
Although DNA metabarcoding is an attractive approach for monitoring biodiversity, it is often
difficult to detect all the species present in a bulk sample. In particular, sequence recovery …

Barcode UK: A complete DNA barcoding resource for the flowering plants and conifers of the United Kingdom

L Jones, AD Twyford, CR Ford… - Molecular Ecology …, 2021 - Wiley Online Library
DNA barcoding and metabarcoding provide new avenues for investigating biological
systems. These techniques require well‐curated reference libraries with extensive coverage …

DNA barcoding of coastal ray-finned fishes in Vietnam

PT Thu, WC Huang, TK Chou, N Van Quan… - PloS one, 2019 - journals.plos.org
DNA barcoding based on a fragment of the cytochrome c oxidase subunit I (COI) gene is
widely applied in species identification and biodiversity studies. The aim of this study was to …

DNA barcoding reveals commercial and health issues in ethnic seafood sold on the Italian market

A Armani, L Guardone, R La Castellana, D Gianfaldoni… - Food Control, 2015 - Elsevier
The number of seafood species sold on Western markets is constantly growing and many
unconventional species are sold in ethnic food outlets. In this work, 68 ethnic seafood …

Longer is not always better: Optimizing barcode length for large-scale species discovery and identification

D Yeo, A Srivathsan, R Meier - Systematic Biology, 2020 - academic.oup.com
New techniques for the species-level sorting of millions of specimens are needed in order to
accelerate species discovery, determine how many species live on earth, and develop …

Identifying fish eggs and larvae: from classic methodologies to DNA metabarcoding

NL Lira, S Tonello, RL Lui, JB Traldi, H Brandão… - Molecular Biology …, 2023 - Springer
Studies involving fish eggs and larvae date back to the end of the nineteenth century. Since
then, studies with ichthyoplankton have proved to be an essential tool, generating …

DNA barcoding Indian freshwater fishes

WS Lakra, M Singh, M Goswami… - … DNA Part A, 2016 - Taylor & Francis
DNA barcoding is a promising technique for species identification using a short
mitochondrial DNA sequence of cytochrome c oxidase I (COI) gene. In the present study …