[HTML][HTML] Flow cytometry as a potential method of measuring bacterial viability in probiotic products: A review

MG Wilkinson - Trends in food science & technology, 2018 - Elsevier
Highlights•A review of flow cytometry for monitoring probiotic culture viability was
undertaken.•Flow cytometry had good correlation with plate counts for concentrated fresh …

Application of flow cytometry to industrial microbial bioprocesses

M Díaz, M Herrero, LA García, C Quirós - Biochemical engineering journal, 2010 - Elsevier
Flow cytometry (FC) is a powerful technique for the rapid analysis of single cells in a mixture,
by means of light-scattering and fluorescence measurements. In biotechnology, the power of …

[HTML][HTML] Xenobiotics shape the physiology and gene expression of the active human gut microbiome

CF Maurice, HJ Haiser, PJ Turnbaugh - Cell, 2013 - cell.com
The human gut contains trillions of microorganisms that influence our health by metabolizing
xenobiotics, including host-targeted drugs and antibiotics. Recent efforts have characterized …

Tracking bacterial lineages in complex and dynamic environments with applications for growth control and persistence

S Bakshi, E Leoncini, C Baker, SJ Cañas-Duarte… - Nature …, 2021 - nature.com
As bacteria transition from exponential to stationary phase, they change substantially in size,
morphology, growth and expression profiles. These responses also vary between individual …

Red but not dead? Membranes of stressed Saccharomyces cerevisiae are permeable to propidium iodide

HM Davey, P Hexley - Environmental microbiology, 2011 - Wiley Online Library
Flow cytometric monitoring of propidium iodide (PI) uptake is a well‐established and rapid
method for monitoring cell death and is used on the basis that the intact membrane of viable …

Genetic diversity of viable, injured, and dead fecal bacteria assessed by fluorescence-activated cell sorting and 16S rRNA gene analysis

K Ben-Amor, H Heilig, H Smidt… - Applied and …, 2005 - journals.asm.org
ABSTRACT A novel approach combining a flow cytometric in situ viability assay with 16S
rRNA gene analysis was used to study the relationship between diversity and activity of the …

[HTML][HTML] Single cell isolation using optical tweezers

A Keloth, O Anderson, D Risbridger, L Paterson - Micromachines, 2018 - mdpi.com
Optical tweezers offer a non-contact method for selecting single cells and translocating them
from one microenvironment to another. We have characterized the optical tweezing of yeast …

Population heterogeneity in microbial bioprocesses: origin, analysis, mechanisms, and future perspectives

AL Heins, D Weuster-Botz - Bioprocess and biosystems engineering, 2018 - Springer
Population heterogeneity is omnipresent in all bioprocesses even in homogenous
environments. Its origin, however, is only so well understood that potential strategies like bet …

Experimental methods and modeling techniques for description of cell population heterogeneity

RL Fernandes, M Nierychlo, L Lundin… - Biotechnology …, 2011 - Elsevier
With the continuous development, in the last decades, of analytical techniques providing
complex information at single cell level, the study of cell heterogeneity has been the focus of …

Genomics as a means to understand bacterial phylogeny and ecological adaptation: the case of bifidobacteria

M Ventura, C Canchaya, GF Fitzgerald… - Antonie Van …, 2007 - Springer
The field of microbiology has in recent years been transformed by the ever increasing
number of publicly available whole-genome sequences. This sequence information has …