Metagenome-derived virus-microbe ratios across ecosystems

P López-García, A Gutiérrez-Preciado… - The ISME …, 2023 - academic.oup.com
It is generally assumed that viruses outnumber cells on Earth by at least tenfold. Virus-to-
microbe ratios (VMR) are largely based on counts of fluorescently labelled virus-like …

Toward nitrogen recovery: Co-cultivation of microalgae and bacteria enhances the production of high-value nitrogen-rich cyanophycin

H Liu, NA Al-Dhabi, H Jiang, B Liu, T Qing, B Feng… - Water Research, 2024 - Elsevier
The algal-bacterial wastewater treatment process has been proven to be highly efficient in
removing nutrients and recovering nitrogen (N). However, the recovery of the valuable N …

Comparative genomics of the ADA clade within the Nostocales

TW Dreher, EW Davis II, RS Mueller, TG Otten - Harmful Algae, 2021 - Elsevier
The ADA clade of Nostocales cyanobacteria, a group that is prominent in current harmful
algal bloom events, now includes over 40 genome sequences with the recent addition of …

Differences in cyanophage and virioplankton production dynamics in eddies of opposite polarity in the North Pacific Subtropical Gyre

J Weissenbach, S Goldin, Y Hulata… - Frontiers in Marine …, 2024 - frontiersin.org
Viruses are abundant in the ocean and influence both the composition of marine
communities and biogeochemical cycles. Despite their high abundance, production rates of …

A Novel Broad Host Range Phage Infecting Alteromonas

X Feng, W Yan, A Wang, R Ma, X Chen, TH Lin… - Viruses, 2021 - mdpi.com
Bacteriophages substantially contribute to bacterial mortality in the ocean and play critical
roles in global biogeochemical processes. Alteromonas is a ubiquitous bacterial genus in …

Diagnosing nutritional stress in the oceans

M Coleman - Science, 2021 - science.org
Marine phytoplankton perform almost half of global photosynthesis, and their capacity for
carbon uptake is governed by the availability of scarce nutrients. Climate change and …

[HTML][HTML] Transport of marine tracer phage particles in soil

X You, R Kallies, K Hild, A Hildebrandt, H Harms… - Science of The Total …, 2022 - Elsevier
Marine phages have been applied to trace ground-and surface water flows. Yet, information
on their transport in soil and related particle intactness is limited. Here we compared the …

Synergy and antagonism in a genome-scale model of metabolic hijacking by bacteriophage

JC Rozum, W Sineath, DN Kim, P Bohutskyi… - bioRxiv, 2024 - biorxiv.org
Bacteriophage auxiliary metabolic genes (AMGs) alter host metabolism by hijacking
reactions. Previous studies used functional annotations to infer AMG impacts, but how these …

Diel population dynamics and mortality of Prochlorococcus in the North Pacific Subtropical Gyre

SJ Beckett, D Demory, AR Coenen, JR Casey… - bioRxiv, 2021 - biorxiv.org
Light-driven forcing of cellular growth processes in the upper mixed layer of the ocean fuels
primary and secondary production at the base of marine food webs. Motivated by high …

Distinct horizontal gene transfer potential of extracellular vesicles versus viral-like particles in marine habitats

S Biller, M Ryan, J Li, A Burger, J Eppley, T Hackl… - 2024 - researchsquare.com
Horizontal gene transfer (HGT) is enabled in part through the movement of DNA within two
broad groups of small (< 0.2 µm), diffusible nanoparticles: extracellular vesicles (EVs) and …