Comprehensive evaluation of map** complex traits in wheat using genome-wide association studies
Genome-wide association studies (GWAS) are effectively applied to detect the marker trait
associations (MTAs) using whole genome-wide variants for complex quantitative traits in …
associations (MTAs) using whole genome-wide variants for complex quantitative traits in …
An overview of STRUCTURE: applications, parameter settings, and supporting software
L Porras-Hurtado, Y Ruiz, C Santos, C Phillips… - Frontiers in …, 2013 - frontiersin.org
Objectives: We present an up-to-date review of STRUCTURE software: one of the most
widely used population analysis tools that allows researchers to assess patterns of genetic …
widely used population analysis tools that allows researchers to assess patterns of genetic …
GAPIT version 3: boosting power and accuracy for genomic association and prediction
Genome-wide association study (GWAS) and genomic prediction/selection (GP/GS) are the
two essential enterprises in genomic research. Due to the great magnitude and complexity …
two essential enterprises in genomic research. Due to the great magnitude and complexity …
[PDF][PDF] Salinity stress in wheat: effects, mechanisms and management strategies.
Salinity stress is a major threat to global food production and its intensity is continuously
increasing because of anthropogenic activities. Wheat is a staple food and a source of …
increasing because of anthropogenic activities. Wheat is a staple food and a source of …
BLINK: a package for the next level of genome-wide association studies with both individuals and markers in the millions
Big datasets, accumulated from biomedical and agronomic studies, provide the potential to
identify genes that control complex human diseases and agriculturally important traits …
identify genes that control complex human diseases and agriculturally important traits …
False discovery rates: a new deal
M Stephens - Biostatistics, 2017 - academic.oup.com
We introduce a new Empirical Bayes approach for large-scale hypothesis testing, including
estimating false discovery rates (FDRs), and effect sizes. This approach has two key …
estimating false discovery rates (FDRs), and effect sizes. This approach has two key …
The blessings of multiple causes
Causal inference from observational data is a vital problem, but it comes with strong
assumptions. Most methods assume that we observe all confounders, variables that affect …
assumptions. Most methods assume that we observe all confounders, variables that affect …
A model of text for experimentation in the social sciences
Statistical models of text have become increasingly popular in statistics and computer
science as a method of exploring large document collections. Social scientists often want to …
science as a method of exploring large document collections. Social scientists often want to …
GAPIT: genome association and prediction integrated tool
Software programs that conduct genome-wide association studies and genomic prediction
and selection need to use methodologies that maximize statistical power, provide high …
and selection need to use methodologies that maximize statistical power, provide high …
Fast and efficient estimation of individual ancestry coefficients
Inference of individual ancestry coefficients, which is important for population genetic and
association studies, is commonly performed using computer-intensive likelihood algorithms …
association studies, is commonly performed using computer-intensive likelihood algorithms …