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[HTML][HTML] Biomedical text mining and its applications in cancer research
F Zhu, P Patumcharoenpol, C Zhang, Y Yang… - Journal of biomedical …, 2013 - Elsevier
Cancer is a malignant disease that has caused millions of human deaths. Its study has a
long history of well over 100years. There have been an enormous number of publications on …
long history of well over 100years. There have been an enormous number of publications on …
An overview of BioCreative II. 5
We present the results of the BioCreative II. 5 evaluation in association with the FEBS Letters
experiment, where authors created Structured Digital Abstracts to capture information about …
experiment, where authors created Structured Digital Abstracts to capture information about …
The CHEMDNER corpus of chemicals and drugs and its annotation principles
The automatic extraction of chemical information from text requires the recognition of
chemical entity mentions as one of its key steps. When develo** supervised named entity …
chemical entity mentions as one of its key steps. When develo** supervised named entity …
Overcoming barriers to NLP for clinical text: the role of shared tasks and the need for additional creative solutions
WW Chapman, PM Nadkarni… - Journal of the …, 2011 - academic.oup.com
This issue of JAMIA focuses on natural language processing (NLP) techniques for clinical-
text information extraction. Several articles are offshoots of the yearly 'Informatics for …
text information extraction. Several articles are offshoots of the yearly 'Informatics for …
Identifying gene-disease associations using centrality on a literature mined gene-interaction network
Motivation: Understanding the role of genetics in diseases is one of the most important aims
of the biological sciences. The completion of the Human Genome Project has led to a rapid …
of the biological sciences. The completion of the Human Genome Project has led to a rapid …
Overview of the protein-protein interaction annotation extraction task of BioCreative II
Background: The biomedical literature is the primary information source for manual protein-
protein interaction annotations. Text-mining systems have been implemented to extract …
protein interaction annotations. Text-mining systems have been implemented to extract …
[HTML][HTML] BioC: a minimalist approach to interoperability for biomedical text processing
A vast amount of scientific information is encoded in natural language text, and the quantity
of such text has become so great that it is no longer economically feasible to have a human …
of such text has become so great that it is no longer economically feasible to have a human …
The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text
Background Determining usefulness of biomedical text mining systems requires realistic
task definition and data selection criteria without artificial constraints, measuring …
task definition and data selection criteria without artificial constraints, measuring …
[PDF][PDF] Overview of SympTEMIST at BioCreative VIII: corpus, guidelines and evaluation of systems for the detection and normalization of symptoms, signs and findings …
Abstract Systems able to detect and normalize symptom mentions from clinical texts are
crucial for healthcare data mining, AI applied to clinical systems, medical analytics and …
crucial for healthcare data mining, AI applied to clinical systems, medical analytics and …
Biomedical text mining and its applications
R Rodriguez-Esteban - PLoS computational biology, 2009 - journals.plos.org
This tutorial is intended for biologists and computational biologists interested in adding text
mining tools to their bioinformatics toolbox. As an illustrative example, the tutorial examines …
mining tools to their bioinformatics toolbox. As an illustrative example, the tutorial examines …