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Water models for biomolecular simulations
Modern simulation and modeling approaches to investigation of biomolecular structure and
function rely heavily on a variety of methods—water models—to approximate the influence …
function rely heavily on a variety of methods—water models—to approximate the influence …
NAD+ cleavage activity by animal and plant TIR domains in cell death pathways
SARM1 (sterile alpha and TIR motif containing 1) is responsible for depletion of
nicotinamide adenine dinucleotide in its oxidized form (NAD+) during Wallerian …
nicotinamide adenine dinucleotide in its oxidized form (NAD+) during Wallerian …
Improvements to the APBS biomolecular solvation software suite
Abstract The Adaptive Poisson–Boltzmann Solver (APBS) software was developed to solve
the equations of continuum electrostatics for large biomolecular assemblages that have …
the equations of continuum electrostatics for large biomolecular assemblages that have …
Structure of the mechanically activated ion channel Piezo1
Piezo1 and Piezo2 are mechanically activated ion channels that mediate touch perception,
proprioception and vascular development. Piezo proteins are distinct from other ion …
proprioception and vascular development. Piezo proteins are distinct from other ion …
[HTML][HTML] Protein electrostatics: From computational and structural analysis to discovery of functional fingerprints and biotechnological design
Computationally driven engineering of proteins aims to allow them to withstand an extended
range of conditions and to mediate modified or novel functions. Therefore, it is crucial to the …
range of conditions and to mediate modified or novel functions. Therefore, it is crucial to the …
Structure of the yeast mitochondrial large ribosomal subunit
Mitochondria have specialized ribosomes that have diverged from their bacterial and
cytoplasmic counterparts. We have solved the structure of the yeast mitoribosomal large …
cytoplasmic counterparts. We have solved the structure of the yeast mitoribosomal large …
Molecular architecture of SF3b and structural consequences of its cancer-related mutations
C Cretu, J Schmitzová, A Ponce-Salvatierra, O Dybkov… - Molecular cell, 2016 - cell.com
SF3b is a heptameric protein complex of the U2 small nuclear ribonucleoprotein (snRNP)
that is essential for pre-mRNA splicing. Mutations in the largest SF3b subunit …
that is essential for pre-mRNA splicing. Mutations in the largest SF3b subunit …
Molecular characterization of AIFM2/FSP1 inhibition by iFSP1-like molecules
TN Xavier da Silva, C Schulte, AN Alves… - Cell Death & …, 2023 - nature.com
Ferroptosis is a form of cell death characterized by phospholipid peroxidation, where
numerous studies have suggested that the induction of ferroptosis is a therapeutic strategy …
numerous studies have suggested that the induction of ferroptosis is a therapeutic strategy …
MyD88 TIR domain higher-order assembly interactions revealed by microcrystal electron diffraction and serial femtosecond crystallography
MyD88 and MAL are Toll-like receptor (TLR) adaptors that signal to induce pro-inflammatory
cytokine production. We previously observed that the TIR domain of MAL (MALTIR) forms …
cytokine production. We previously observed that the TIR domain of MAL (MALTIR) forms …
Manipulation of GES and ERG20 for geraniol overproduction in Saccharomyces cerevisiae
GZ Jiang, MD Yao, Y Wang, L Zhou, TQ Song, H Liu… - Metabolic …, 2017 - Elsevier
Manipulation of monoterpene synthases to maximize flux towards targeted products from
GPP (geranyl diphosphate) is the main challenge for heterologous monoterpene …
GPP (geranyl diphosphate) is the main challenge for heterologous monoterpene …