Endoplasmic reticulum stress and lipids in health and diseases

C Celik, SYT Lee, WS Yap, G Thibault - Progress in Lipid Research, 2023 - Elsevier
The endoplasmic reticulum (ER) is a complex and dynamic organelle that regulates many
cellular pathways, including protein synthesis, protein quality control, and lipid synthesis …

Advances in targeted proteomics and applications to biomedical research

T Shi, E Song, S Nie, KD Rodland, T Liu, WJ Qian… - …, 2016 - Wiley Online Library
Targeted proteomics technique has emerged as a powerful protein quantification tool in
systems biology, biomedical research, and increasing for clinical applications. The most …

Relative and absolute quantitation in mass spectrometry–based proteomics

JA Ankney, A Muneer, X Chen - Annual review of analytical …, 2018 - annualreviews.org
Mass spectrometry–based quantitative proteomics is a powerful tool for gaining insights into
function and dynamics of biological systems. However, peptides with different sequences …

Proteomic analysis of urinary extracellular vesicles from high Gleason score prostate cancer

K Fujita, H Kume, K Matsuzaki, A Kawashima, T Ujike… - Scientific reports, 2017 - nature.com
Extracellular vesicles (EVs) are microvesicles secreted from various cell types. We aimed to
discover a new biomarker for high Gleason score (GS) prostate cancer (PCa) in urinary EVs …

CD95/Fas increases stemness in cancer cells by inducing a STAT1-dependent type I interferon response

AS Qadir, P Ceppi, S Brockway, C Law, L Mu… - Cell reports, 2017 - cell.com
Stimulation of CD95/Fas drives and maintains cancer stem cells (CSCs). We now report that
this involves activation of signal transducer and activator of transcription 1 (STAT1) and …

Integral membrane proteins in proteomics. How to break open the black box?

O Vit, J Petrak - Journal of proteomics, 2017 - Elsevier
Integral membrane proteins (IMPs) are coded by 20–30% of human genes and execute
important functions–transmembrane transport, signal transduction, cell-cell communication …

Proteomic analysis of urinary and tissue‐exudative extracellular vesicles to discover novel bladder cancer biomarkers

E Tomiyama, K Matsuzaki, K Fujita, T Shiromizu… - Cancer …, 2021 - Wiley Online Library
Proteomic analysis of urinary extracellular vesicles (EVs) is a powerful approach to discover
potential bladder cancer (BCa) biomarkers, however urine contains numerous EVs derived …

CD177+ neutrophils suppress epithelial cell tumourigenesis in colitis-associated cancer and predict good prognosis in colorectal cancer

G Zhou, K Peng, Y Song, W Yang, W Shu, T Yu… - …, 2018 - academic.oup.com
Neutrophils are found to be infiltrated in tumour tissues of patients with colitis-associated
cancer (CAC) and colorectal cancer (CRC), and CD177 is mainly expressed in neutrophils …

A timely shift from shotgun to targeted proteomics and how it can be groundbreaking for cancer research

SS Faria, CFM Morris, AR Silva, MP Fonseca… - Frontiers in …, 2017 - frontiersin.org
The fact that cancer is a leading cause of death all around the world has naturally sparked
major efforts in the pursuit of novel and more efficient biomarkers that could better serve as …

Quantitation of putative colorectal cancer biomarker candidates in serum extracellular vesicles by targeted proteomics

T Shiromizu, H Kume, M Ishida, J Adachi, M Kano… - Scientific Reports, 2017 - nature.com
At the moment, there is no sensitive clinical test for detecting early-stage colorectal cancer
(CRC). Target proteomics has enabled high-throughput verification of hundreds of …