Soil aggregate microbial communities: towards understanding microbiome interactions at biologically relevant scales
Soils contain a tangle of minerals, water, nutrients, gases, plant roots, decaying organic
matter, and microorganisms which work together to cycle nutrients and support terrestrial …
matter, and microorganisms which work together to cycle nutrients and support terrestrial …
Taxonomic assignment of uncultivated prokaryotic virus genomes is enabled by gene-sharing networks
Microbiomes from every environment contain a myriad of uncultivated archaeal and
bacterial viruses, but studying these viruses is hampered by the lack of a universal, scalable …
bacterial viruses, but studying these viruses is hampered by the lack of a universal, scalable …
Soil viruses are underexplored players in ecosystem carbon processing
Rapidly thawing permafrost harbors∼ 30 to 50% of global soil carbon, and the fate of this
carbon remains unknown. Microorganisms will play a central role in its fate, and their viruses …
carbon remains unknown. Microorganisms will play a central role in its fate, and their viruses …
Cooling perspectives on the risk of pathogenic viruses from thawing permafrost
Climate change is inducing wide-scale permafrost thaw in the Arctic and subarctic, triggering
concerns that long-dormant pathogens could reemerge from the thawing ground and initiate …
concerns that long-dormant pathogens could reemerge from the thawing ground and initiate …
Tundra soil viruses mediate responses of microbial communities to climate warming
The rise of global temperature causes the degradation of the substantial reserves of carbon
(C) stored in tundra soils, in which microbial processes play critical roles. Viruses are known …
(C) stored in tundra soils, in which microbial processes play critical roles. Viruses are known …
[HTML][HTML] Thousands of small, novel genes predicted in global phage genomes
Summary Small genes (< 150 nucleotides) have been systematically overlooked in phage
genomes. We employ a large-scale comparative genomics approach to predict> 40,000 …
genomes. We employ a large-scale comparative genomics approach to predict> 40,000 …
DNA viral diversity, abundance, and functional potential vary across grassland soils with a range of historical moisture regimes
Soil viruses are abundant, but the influence of the environment and climate on soil viruses
remains poorly understood. Here, we addressed this gap by comparing the diversity …
remains poorly understood. Here, we addressed this gap by comparing the diversity …
Effects of experimentally elevated virus abundance on soil carbon cycling across varying ecosystem types
Viruses are abundant and diverse members of soil communities, but their influences on soil
biogeochemical cycling are poorly understood. To assess the potential for viruses to …
biogeochemical cycling are poorly understood. To assess the potential for viruses to …
Stable-isotope-informed, genome-resolved metagenomics uncovers potential cross-kingdom interactions in rhizosphere soil
The functioning, health, and productivity of soil are intimately tied to a complex network of
interactions, particularly in plant root-associated rhizosphere soil. We conducted a stable …
interactions, particularly in plant root-associated rhizosphere soil. We conducted a stable …
Novel viral communities potentially assisting in carbon, nitrogen, and sulfur metabolism in the upper slope sediments of Mariana Trench
Viruses are ubiquitous in the oceans. Even in the deep sediments of the Mariana Trench,
viruses have high productivity. However, little is known about their species composition and …
viruses have high productivity. However, little is known about their species composition and …