Ski2-like RNA helicase structures: common themes and complex assemblies

SJ Johnson, RN Jackson - RNA biology, 2013 - Taylor & Francis
Ski2-like RNA helicases are large multidomain proteins involved in a variety of RNA
processing and degradation events. Recent structures of Mtr4, Ski2 and Brr2 provide our first …

TRAMP complex enhances RNA degradation by the nuclear exosome component Rrp6 2

KP Callahan, JS Butler - Journal of Biological Chemistry, 2010 - jbc.org
The RNA-processing exosome contains ribonucleases that degrade aberrant RNAs in
archael and eukaryotic cells. In Saccharomyces cerevisiae, the nuclear/nucleolar 3′–5 …

Structural components and architectures of RNA exosomes

K Januszyk, CD Lima - RNA exosome, 2010 - Springer
A large body of structural work conducted over the past ten years has elucidated
mechanistic details related to 3′ to 5′ processing and decay of RNA substrates by the …

Analysis of HIV-1 expression level and sense of transcription by high-throughput sequencing of the infected cell

G Lefebvre, S Desfarges, F Uyttebroeck… - Journal of …, 2011 - journals.asm.org
Next-generation sequencing offers an unprecedented opportunity to jointly analyze cellular
and viral transcriptional activity without prerequisite knowledge of the nature of the …

The Mtr4 ratchet helix and arch domain both function to promote RNA unwinding

LL Taylor, RN Jackson, M Rexhepaj… - Nucleic acids …, 2014 - academic.oup.com
Mtr4 is a conserved Ski2-like RNA helicase and a subunit of the TRAMP complex that
activates exosome-mediated 3′-5′ turnover in nuclear RNA surveillance and processing …

Shhh! RNAi-dependent and-independent pathways at work

A Mullard - Nature Reviews Molecular Cell Biology, 2007 - nature.com
The packaging of DNA into heterochromatin domains is crucial for gene silencing and
cellular processes, and occurs at centromeres, telomeres and the mating-type locus in …

An Investigation into the Multifaceted Regulation of Eukaryotic Gene Expression in Schizosaccharomyces Pombe

BF Marayati - 2021 - search.proquest.com
The regulation of gene expression in a multicellular eukaryotic organism gives rise to
multiple cell types despite having the same organismal genetic code. Early on in our …

[PDF][PDF] Studying the RNA Surveillance Activity of Mtr4 and the Tramp Complex Using Hydrogen Deuterium Exchange Mass Spectrometry

N Zhang - 2021 - utd-ir.tdl.org
Mtr4 is an essential ribonucleic acid (RNA) helicase that plays a central role in RNA
processing and degradation as an activator of the nuclear exosome. Mtr4 can carry out its …

[LIVRE][B] Detailed analysis of the domains of Mtr4 and how they regulate helicase activity

L Taylor - 2014 - search.proquest.com
There are numerous RNAs transcribed in the cell that are not directly involved in protein
translation. Maintaining proper levels of RNA is crucial for cell viability, making RNA …

Rrp44, A EUKARYOTIC EXOSOME SUBUNIT WITH HYDROLYTIC ENDORIBONUCLEASE AND PROCESSIVE EXORIBONUCLEASE ACTIVITIES

RPIN DOMAIN - RNA Exosome, 2011 - books.google.com
As discussed earlier, none of the human or budding yeast subunits that comprise the 9-
component exosome core retain phosphorolytic exoribonuclease activity because most of …