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Modulating biomolecular condensates: a novel approach to drug discovery
In the past decade, membraneless assemblies known as biomolecular condensates have
been reported to play key roles in many cellular functions by compartmentalizing specific …
been reported to play key roles in many cellular functions by compartmentalizing specific …
[HTML][HTML] The AlphaFold database of protein structures: a biologist's guide
A David, S Islam, E Tankhilevich… - Journal of molecular …, 2022 - Elsevier
AlphaFold, the deep learning algorithm developed by DeepMind, recently released the three-
dimensional models of the whole human proteome to the scientific community. Here we …
dimensional models of the whole human proteome to the scientific community. Here we …
[HTML][HTML] Functional partitioning of transcriptional regulators by patterned charge blocks
H Lyons, RT Veettil, P Pradhan, C Fornero… - Cell, 2023 - cell.com
Components of transcriptional machinery are selectively partitioned into specific
condensates, often mediated by protein disorder, yet we know little about how this specificity …
condensates, often mediated by protein disorder, yet we know little about how this specificity …
Highly accurate protein structure prediction for the human proteome
Protein structures can provide invaluable information, both for reasoning about biological
processes and for enabling interventions such as structure-based drug development or …
processes and for enabling interventions such as structure-based drug development or …
[HTML][HTML] A disordered region controls cBAF activity via condensation and partner recruitment
Intrinsically disordered regions (IDRs) represent a large percentage of overall nuclear
protein content. The prevailing dogma is that IDRs engage in non-specific interactions …
protein content. The prevailing dogma is that IDRs engage in non-specific interactions …
[HTML][HTML] Macromolecular condensation buffers intracellular water potential
Optimum protein function and biochemical activity critically depends on water availability
because solvent thermodynamics drive protein folding and macromolecular interactions …
because solvent thermodynamics drive protein folding and macromolecular interactions …
[HTML][HTML] A unified model for the function of YTHDF proteins in regulating m6A-modified mRNA
Summary N 6-methyladenosine (m 6 A) is the most abundant mRNA nucleotide modification
and regulates critical aspects of cellular physiology and differentiation. m 6 A is thought to …
and regulates critical aspects of cellular physiology and differentiation. m 6 A is thought to …
AIUPred: combining energy estimation with deep learning for the enhanced prediction of protein disorder
Intrinsically disordered proteins and protein regions (IDPs/IDRs) carry out important
biological functions without relying on a single well-defined conformation. As these proteins …
biological functions without relying on a single well-defined conformation. As these proteins …
O-GlcNAcylation determines the translational regulation and phase separation of YTHDF proteins
Y Chen, R Wan, Z Zou, L Lao, G Shao, Y Zheng… - Nature cell …, 2023 - nature.com
Abstract N 6-methyladenosine (m6A) is the most abundant internal mRNA nucleotide
modification in mammals, regulating critical aspects of cell physiology and differentiation …
modification in mammals, regulating critical aspects of cell physiology and differentiation …
[HTML][HTML] Transcription factors activate genes through the phase-separation capacity of their activation domains
Gene expression is controlled by transcription factors (TFs) that consist of DNA-binding
domains (DBDs) and activation domains (ADs). The DBDs have been well characterized …
domains (DBDs) and activation domains (ADs). The DBDs have been well characterized …