Biodiversity underlies ecosystem resilience, ecosystem function, sustainable economies,
and human well‐being. Understanding how biodiversity sustains ecosystems under …

Genomic data are ubiquitous across disciplines, from agriculture to biodiversity, ecology,
evolution and human health. However, these datasets often contain noise or errors and are …

Abstract Summary ipyrad is a free and open source tool for assembling and analyzing
restriction site-associated DNA sequence datasets using de novo and/or reference-based …

The advances accelerated by next‐generation sequencing and long‐read sequencing
technologies continue to provide an impetus for plant phylogenetic study. In the past …

Restriction site-associated DNA sequencing (RAD-seq) allows for the genome-wide
discovery and genoty** of single-nucleotide polymorphisms in hundreds of individuals at …

Restriction site‐Associated DNA sequencing (RAD‐seq) has become a widely adopted
method for genoty** populations of model and non‐model organisms. Generating a …

A common method of minimizing errors in large DNA sequence data sets is to drop variable
sites with a minor allele frequency (MAF) below some specified threshold. Although …

Whole‐genome resequencing (WGR) is a powerful method for addressing fundamental
evolutionary biology questions that have not been fully resolved using traditional methods …

The rapidly emerging field of macrogenetics focuses on analysing publicly accessible
genetic datasets from thousands of species to explore large-scale patterns and predictors of …

Haploid high quality reference genomes are an important resource in genomic research
projects. A consequence is that DNA fragments carrying the reference allele will be more …