Protein post-translational modifications in bacteria

B Macek, K Forchhammer, J Hardouin… - Nature Reviews …, 2019 - nature.com
Over the past decade the number and variety of protein post-translational modifications that
have been detected and characterized in bacteria have rapidly increased. Most post …

Translation in prokaryotes

MV Rodnina - Cold Spring Harbor perspectives in …, 2018 - cshperspectives.cshlp.org
This review summarizes our current understanding of translation in prokaryotes, focusing on
the mechanistic and structural aspects of each phase of translation: initiation, elongation …

Cyclic immonium ion of lactyllysine reveals widespread lactylation in the human proteome

N Wan, N Wang, S Yu, H Zhang, S Tang, D Wang… - Nature …, 2022 - nature.com
Lactylation was initially discovered on human histones. Given its nascence, its occurrence
on nonhistone proteins and downstream functional consequences remain elusive. Here we …

Proline Analogues

V Kubyshkin, M Rubini - Chemical Reviews, 2024 - ACS Publications
Within the canonical repertoire of the amino acid involved in protein biogenesis, proline
plays a unique role as an amino acid presenting a modified backbone rather than a side …

Quantification of protein glycosylation using nanopores

RCA Versloot, FLR Lucas, L Yakovlieva… - Nano Letters, 2022 - ACS Publications
Although nanopores can be used for single-molecule sequencing of nucleic acids using low-
cost portable devices, the characterization of proteins and their modifications has yet to be …

Ribosome pausing, arrest and rescue in bacteria and eukaryotes

AR Buskirk, R Green - … of the Royal Society B: Biological …, 2017 - royalsocietypublishing.org
Ribosomes translate genetic information into polypeptides in several basic steps: initiation,
elongation, termination and recycling. When ribosomes are arrested during elongation or …

Structural basis for polyproline-mediated ribosome stalling and rescue by the translation elongation factor EF-P

P Huter, S Arenz, LV Bock, M Graf, JO Frister, A Heuer… - Molecular cell, 2017 - cell.com
Ribosomes synthesizing proteins containing consecutive proline residues become stalled
and require rescue via the action of uniquely modified translation elongation factors, EF-P in …

The human mitochondrial translation factor TACO1 alleviates mitoribosome stalling at polyproline stretches

M Brischigliaro, A Krüger, JC Moran… - Nucleic acids …, 2024 - academic.oup.com
The prokaryotic translation elongation factor P (EF-P) and the eukaryotic/archaeal
counterparts eIF5A/aIF5A are proteins that serve a crucial role in mitigating ribosomal …

Resolution of ribosomal stalling by EF-P and ABCF ATPases YfmR and YkpA/YbiT

H Takada, K Fujiwara, GC Atkinson… - Nucleic Acids …, 2024 - academic.oup.com
Efficiency of protein synthesis on the ribosome is strongly affected by the amino acid
composition of the assembled amino acid chain. Challenging sequences include proline …

Structure of the hypusinylated eukaryotic translation factor eIF-5A bound to the ribosome

C Schmidt, T Becker, A Heuer, K Braunger… - Nucleic acids …, 2016 - academic.oup.com
During protein synthesis, ribosomes become stalled on polyproline-containing sequences,
unless they are rescued in archaea and eukaryotes by the initiation factor 5A (a/eIF-5A) and …