Virus metagenomics in farm animals: a systematic review

KTT Kwok, DF Nieuwenhuijse, MVT Phan… - Viruses, 2020 - mdpi.com
A majority of emerging infectious diseases are of zoonotic origin. Metagenomic Next-
Generation Sequencing (mNGS) has been employed to identify uncommon and novel …

Cross-species transmission and emergence of novel viruses from birds

JFW Chan, KKW To, H Chen, KY Yuen - Current opinion in virology, 2015 - Elsevier
Highlights•The role of birds in cross-species transmission and emergence of novel viruses
such as avian influenza A viruses are discussed.•The novel avian viruses identified between …

The viruses of wild pigeon drop**s

TG Phan, NP Vo, A Boros, P Pankovics, G Reuter… - PloS one, 2013 - journals.plos.org
Birds are frequent sources of emerging human infectious diseases. Viral particles were
enriched from the feces of 51 wild urban pigeons (Columba livia) from Hong Kong and …

Evolution of selective-sequencing approaches for virus discovery and virome analysis

A Kumar, S Murthy, A Kapoor - Virus research, 2017 - Elsevier
Recent advances in sequencing technologies have transformed the field of virus discovery
and virome analysis. Once mostly confined to the traditional Sanger sequencing based …

Recombinant Viruses from the Picornaviridae Family Occurring in Racing Pigeons

E Łukaszuk, D Dziewulska, T Stenzel - Viruses, 2024 - mdpi.com
Viruses from Picornaviridae family are known pathogens of poultry, although the information
on their occurrence and pathogenicity in pigeons is scarce. In this research, efforts are made …

The roles of picornavirus untranslated regions in infection and innate immunity

A Kloc, DK Rai, E Rieder - Frontiers in microbiology, 2018 - frontiersin.org
Viral genomes have evolved to maximize their potential of overcoming host defense
mechanisms and to induce a variety of disease syndromes. Structurally, a genome of a virus …

[HTML][HTML] Rapid detection of pigeon Megrivirus using TaqMan real-time PCR technology

J Zhang, H Fu, C Chen, J Jiang, Y Lin, B Jiang, L Lin… - Poultry Science, 2023 - Elsevier
Megriviruses have been identified from fecal samples in wild pigeons in Hong Kong (China)
and Hungary. In this study, the genomic sequences of pigeon Megriviruses (PiMeVs) were …

Recent progress in the characterization of avian enteric viruses

JM Day, L Zsak - Avian Diseases, 2013 - meridian.allenpress.com
Despite the importance of the poultry gut, remarkably little is known about the complex gut
microbial community. Enteric disease syndromes such as runting-stunting syndrome in …

Host subtraction, filtering and assembly validations for novel viral discovery using next generation sequencing data

GM Daly, RM Leggett, W Rowe, S Stubbs, M Wilkinson… - PloS one, 2015 - journals.plos.org
The use of next generation sequencing (NGS) to identify novel viral sequences from
eukaryotic tissue samples is challenging. Issues can include the low proportion and copy …

Comparative analysis of the intestinal bacterial and RNA viral communities from sentinel birds placed on selected broiler chicken farms

JM Day, BB Oakley, BS Seal, L Zsak - PloS one, 2015 - journals.plos.org
There is a great deal of interest in characterizing the complex microbial communities in the
poultry gut, and in understanding the effects of these dynamic communities on poultry …