Establishing, maintaining and modifying DNA methylation patterns in plants and animals

JA Law, SE Jacobsen - Nature Reviews Genetics, 2010 - nature.com
Cytosine DNA methylation is a stable epigenetic mark that is crucial for diverse biological
processes, including gene and transposon silencing, imprinting and X chromosome …

RNA-directed DNA methylation: an epigenetic pathway of increasing complexity

MA Matzke, RA Mosher - Nature Reviews Genetics, 2014 - nature.com
RNA-directed DNA methylation (RdDM) is the major small RNA-mediated epigenetic
pathway in plants. RdDM requires a specialized transcriptional machinery that comprises …

Plant small RNAs: their biogenesis, regulatory roles, and functions

J Zhan, BC Meyers - Annual Review of Plant Biology, 2023 - annualreviews.org
Plant cells accumulate small RNA molecules that regulate plant development, genome
stability, and environmental responses. These small RNAs fall into three major classes …

The role of mitochondria in apoptosis

C Wang, RJ Youle - Annual review of genetics, 2009 - annualreviews.org
Mitochondria play key roles in activating apoptosis in mammalian cells. Bcl-2 family
members regulate the release of proteins from the space between the mitochondrial inner …

Non-CG methylation patterns shape the epigenetic landscape in Arabidopsis

H Stroud, T Do, J Du, X Zhong, S Feng… - Nature structural & …, 2014 - nature.com
DNA methylation occurs in CG and non-CG sequence contexts. Non-CG methylation is
abundant in plants and is mediated by CHROMOMETHYLASE (CMT) and DOMAINS …

Classification and comparison of small RNAs from plants

MJ Axtell - Annual review of plant biology, 2013 - annualreviews.org
Regulatory small RNAs, which range in size from 20 to 24 nucleotides, are ubiquitous
components of endogenous plant transcriptomes, as well as common responses to …

The Selaginella genome identifies genetic changes associated with the evolution of vascular plants

JA Banks, T Nishiyama, M Hasebe, JL Bowman… - science, 2011 - science.org
Vascular plants appeared~ 410 million years ago, then diverged into several lineages of
which only two survive: the euphyllophytes (ferns and seed plants) and the lycophytes. We …

The Plant Vascular System: Evolution, Development and FunctionsF

WJ Lucas, A Groover, R Lichtenberger… - Journal of integrative …, 2013 - Wiley Online Library
Contents I. Introduction 295 II. Evolution of the Plant Vascular System 295 III. Phloem
Development & Differentiation 300 IV. Molecular Mechanisms Underlying Xylem Cell …

Small RNAs and their roles in plant development

X Chen - Annual Review of Cell and Developmental, 2009 - annualreviews.org
Small RNAs of 20–30 nucleotides guide regulatory processes at the DNA or RNA level in a
wide range of eukaryotic organisms. Many, although not all, small RNAs are processed from …

Small RNA sorting: matchmaking for Argonautes

B Czech, GJ Hannon - Nature Reviews Genetics, 2011 - nature.com
Small RNAs directly or indirectly impact nearly every biological process in eukaryotic cells.
To perform their myriad roles, not only must precise small RNA species be generated, but …