A guide to conquer the biological network era using graph theory

M Koutrouli, E Karatzas, D Paez-Espino… - … in bioengineering and …, 2020 - frontiersin.org
Networks are one of the most common ways to represent biological systems as complex sets
of binary interactions or relations between different bioentities. In this article, we discuss the …

Ecosystems monitoring powered by environmental genomics: a review of current strategies with an implementation roadmap

T Cordier, L Alonso‐Sáez… - Molecular …, 2021 - Wiley Online Library
A decade after environmental scientists integrated high‐throughput sequencing
technologies in their toolbox, the genomics‐based monitoring of anthropogenic impacts on …

Naturalized alien floras still carry the legacy of European colonialism

B Lenzner, G Latombe, A Schertler… - Nature Ecology & …, 2022 - nature.com
The redistribution of alien species across the globe accelerated with the start of European
colonialism. European powers were responsible for the deliberate and accidental …

The functional complex network approach to foster forest resilience to global changes

C Messier, J Bauhus, F Doyon, F Maure… - Forest …, 2019 - Springer
Human impacts on Earth's ecosystems have greatly intensified in the last decades. This is
reflected in unexpected disturbance events, as well as new and increasing socio-economic …

Evaluation of the policy-driven ecological network in the Three-North Shelterbelt region of China

H Mu, X Li, H Ma, X Du, J Huang, W Su, Z Yu… - Landscape and Urban …, 2022 - Elsevier
Abstract The Three-North Shelterbelt (TNS) program is one of China's major ecological
restoration projects over the past few decades. However, evaluation of the ecological …

Prey–predator phenological mismatch under climate change

M Damien, K Tougeron - Current opinion in insect science, 2019 - Elsevier
Highlights•Climate change is disrupting seasonal rhythms and developmental rate of
insects.•Phenological shifts within and among trophic levels are modifying biotic …

Synthetic ecology of the human gut microbiota

G Vrancken, AC Gregory, GRB Huys, K Faust… - Nature Reviews …, 2019 - nature.com
Despite recent advances in sequencing and culturing, a deep knowledge of the wiring and
functioning of the human gut ecosystem and its microbiota as a community is still missing. A …

Novel community data in ecology-properties and prospects

F Hartig, N Abrego, A Bush, JM Chase… - Trends in Ecology & …, 2024 - cell.com
New technologies for monitoring biodiversity such as environmental (e) DNA, passive
acoustic monitoring, and optical sensors promise to generate automated spatiotemporal …

Conceptualizing ecosystem services using social–ecological networks

MR Felipe-Lucia, AM Guerrero, SM Alexander… - Trends in Ecology & …, 2022 - cell.com
Social–ecological networks (SENs) represent the complex relationships between ecological
and social systems and are a useful tool for analyzing and managing ecosystem services …

Network ecology in dynamic landscapes

MJ Fortin, MRT Dale… - Proceedings of the …, 2021 - royalsocietypublishing.org
Network ecology is an emerging field that allows researchers to conceptualize and analyse
ecological networks and their dynamics. Here, we focus on the dynamics of ecological …