Fluorescent probes for nucleic acid visualization in fixed and live cells

AS Boutorine, DS Novopashina, OA Krasheninina… - Molecules, 2013 - mdpi.com
This review analyses the literature concerning non-fluorescent and fluorescent probes for
nucleic acid imaging in fixed and living cells from the point of view of their suitability for …

Hybridization of DNA and PNA molecular beacons to single-stranded and double-stranded DNA targets

H Kuhn, VV Demidov, JM Coull… - Journal of the …, 2002 - ACS Publications
Molecular beacons are sensitive fluorescent probes hybridizing selectively to designated
DNA and RNA targets. They have recently become practical tools for quantitative real-time …

Fluorescence based strategies for genetic analysis

RT Ranasinghe, T Brown - Chemical Communications, 2005 - pubs.rsc.org
Synthetic chemistry has been central to the design of modern methods of genetic analysis. In
this article, we discuss the underlying chemistry and biophysical principles that have been …

Sequence specific fluorescence detection of double strand DNA

VC Rucker, S Foister, C Melander… - Journal of the American …, 2003 - ACS Publications
Methods for the fluorescent detection of specific sequences of double strand DNA in
homogeneous solution may be useful in the field of human genetics. A series of hairpin …

Synthesis of conformationally preorganized and cell-permeable guanidine-based γ-peptide nucleic acids (γGPNAs)

B Sahu, V Chenna, KL Lathrop… - The Journal of …, 2009 - ACS Publications
A general method for preparing optically pure guanidine-based γ-peptide nucleic acid
(γGPNA) monomers for all four natural nucleobases (A, C, G, and T) is described. These …

Gamma peptide nucleic acids: As orthogonal nucleic acid recognition codes for organizing molecular self-assembly

I Sacui, WC Hsieh, A Manna, B Sahu… - Journal of the American …, 2015 - ACS Publications
Nucleic acids are an attractive platform for organizing molecular self-assembly because of
their specific nucleobase interactions and defined length scale. Routinely employed in the …

Quenched auto-ligating DNAs: multicolor identification of nucleic acids at single nucleotide resolution

S Sando, H Abe, ET Kool - Journal of the American Chemical …, 2004 - ACS Publications
We describe the synthesis and study of multicolor quenched autoligating (QUAL) probes for
identification and discrimination of closely related RNA and DNA sequences in solution and …

Fluorescent nucleic acid systems for biosensors

A Podder, HJ Lee, BH Kim - Bulletin of the Chemical Society of …, 2021 - academic.oup.com
Modified nucleic acids have a wide range of applications in many areas of biochemistry. In
particular, fluorescence-based nucleic acid systems have been studied extensively for their …

Light‐up hoechst–DNA aptamer pair: generation of an aptamer‐selective fluorophore from a conventional DNA‐staining dye

S Sando, A Narita, Y Aoyama - ChemBioChem, 2007 - Wiley Online Library
We have designed a strategy to generate a light‐up fluorophore–aptamer pair based on a
down‐modification of a conventional DNA‐staining dye to suppress its affinity to the original …

Novel DNA probes with low background and high hybridization-triggered fluorescence

EA Lukhtanov, SG Lokhov, VV Gorn… - Nucleic acids …, 2007 - academic.oup.com
Novel fluorogenic DNA probes are described. The probes (called Pleiades) have a minor
groove binder (MGB) and a fluorophore at the 5′-end and a non-fluorescent quencher at …