Tree edit distance: Robust and memory-efficient
Hierarchical data are often modelled as trees. An interesting query identifies pairs of similar
trees. The standard approach to tree similarity is the tree edit distance, which has …
trees. The standard approach to tree similarity is the tree edit distance, which has …
RTED: a robust algorithm for the tree edit distance
We consider the classical tree edit distance between ordered labeled trees, which is defined
as the minimum-cost sequence of node edit operations that transform one tree into another …
as the minimum-cost sequence of node edit operations that transform one tree into another …
[LIVRE][B] Algorithms on trees and graphs
G Valiente - 2002 - Springer
The notion of graph which is most useful in computer science is that of a directed graph or
just a graph. A graph is a combinatorial structure consisting of a finite nonempty set of …
just a graph. A graph is a combinatorial structure consisting of a finite nonempty set of …
Efficient computation of the tree edit distance
We consider the classical tree edit distance between ordered labelled trees, which is
defined as the minimum-cost sequence of node edit operations that transform one tree into …
defined as the minimum-cost sequence of node edit operations that transform one tree into …
A survey on tree matching and XML retrieval
With the increasing number of available XML documents, numerous approaches for retrieval
have been proposed in the literature. They usually use the tree representation of documents …
have been proposed in the literature. They usually use the tree representation of documents …
Introduction to RNA secondary structure comparison
Many methods have been proposed for RNA secondary structure comparison, and new
ones are still being developed. In this chapter, we first consider structure representations …
ones are still being developed. In this chapter, we first consider structure representations …
X-TED: Massive Parallelization of Tree Edit Distance
The tree edit distance (TED) has been found in a wide spectrum of applications in artificial
intelligence, bioinformatics, and other areas, which serves as a metric to quantify the …
intelligence, bioinformatics, and other areas, which serves as a metric to quantify the …
Alignments of RNA structures.
We describe a theoretical unifying framework to express the comparison of RNA structures,
which we call alignment hierarchy. This framework relies on the definition of common …
which we call alignment hierarchy. This framework relies on the definition of common …
Breaking the cubic barrier for (unweighted) tree edit distance
X Mao - SIAM Journal on Computing, 2023 - SIAM
The (unweighted) tree edit distance problem for node trees asks to compute a measure of
dissimilarity between two rooted trees with node labels. The current best algorithm from …
dissimilarity between two rooted trees with node labels. The current best algorithm from …
A new perspective on the tree edit distance
The tree edit distance (TED), defined as the minimum-cost sequence of node operations that
transform one tree into another, is a well-known distance measure for hierarchical data …
transform one tree into another, is a well-known distance measure for hierarchical data …