Applications of hydrogen/deuterium exchange MS from 2012 to 2014

GF Pirrone, RE Iacob, JR Engen - Analytical chemistry, 2015 - ACS Publications
Hydrogen/deuterium exchange (HDX) detected by mass spectrometry (MS) is extraordinarily
useful in the study of many aspects of proteins, especially the analysis of protein …

From processivity to genome maintenance: the many roles of sliding clamps

M Mulye, MI Singh, V Jain - Genes, 2022 - mdpi.com
Sliding clamps play a pivotal role in the process of replication by increasing the processivity
of the replicative polymerase. They also serve as an interacting platform for a plethora of …

An anti-ANGPTL3/8 antibody decreases circulating triglycerides by binding to a LPL-inhibitory leucine zipper-like motif

D Balasubramaniam, O Schroeder, AM Russell… - Journal of Lipid …, 2022 - ASBMB
Triglycerides (TG) are required for fatty acid transport and storage and are essential for
human health. Angiopoietin-like-protein 8 (ANGPTL8) has previously been shown to form a …

Advanced assessment of the physicochemical characteristics of Remicade® and Inflectra® by sensitive LC/MS techniques

J Fang, C Doneanu, WR Alley Jr, YQ Yu, A Beck… - MAbs, 2016 - Taylor & Francis
In this study, we demonstrate the utility of ultra-performance liquid chromatography coupled
to mass spectrometry (MS) and ion-mobility spectrometry (IMS) to characterize and compare …

Acetylation of PCNA sliding surface by Eco1 promotes genome stability through homologous recombination

P Billon, J Li, JP Lambert, Y Chen, V Tremblay… - Molecular cell, 2017 - cell.com
During DNA replication, proliferating cell nuclear antigen (PCNA) adopts a ring-shaped
structure to promote processive DNA synthesis, acting as a sliding clamp for polymerases …

Beyond the mono-nucleosome

JK Dias, S D'Arcy - Biochemical Society Transactions, 2025 - portlandpress.com
Nucleosomes, the building block of chromatin, are responsible for regulating access to the
DNA sequence. This control is critical for essential cellular processes, including transcription …

Conformational exchange divergence along the evolutionary pathway of eosinophil-associated ribonucleases

DN Bernard, C Narayanan, T Hempel, K Bafna… - Structure, 2023 - cell.com
The evolutionary role of conformational exchange in the emergence and preservation of
function within structural homologs remains elusive. While protein engineering has revealed …

The bacterial DNA sliding clamp, β-clamp: structure, interactions, dynamics and drug discovery

S Simonsen, CK Søgaard, JG Olsen, M Otterlei… - Cellular and Molecular …, 2024 - Springer
DNA replication is a tightly coordinated event carried out by a multiprotein replication
complex. An essential factor in the bacterial replication complex is the ring-shaped DNA …

Dynamics of open DNA sliding clamps

AJ Oakley - PLoS One, 2016 - journals.plos.org
A range of enzymes in DNA replication and repair bind to DNA-clamps: torus-shaped
proteins that encircle double-stranded DNA and act as mobile tethers. Clamps from viruses …

Replisome assembly at bacterial chromosomes and iteron plasmids

KE Wegrzyn, M Gross, U Uciechowska… - Frontiers in molecular …, 2016 - frontiersin.org
The proper initiation and occurrence of DNA synthesis depends on the formation and
rearrangements of nucleoprotein complexes within the origin of DNA replication. In this …