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Protein sequencing via nanopore based devices: a nanofluidics perspective
Proteins perform a huge number of central functions in living organisms, thus all the new
techniques allowing their precise, fast and accurate characterization at single-molecule level …
techniques allowing their precise, fast and accurate characterization at single-molecule level …
Unidirectional single-file transport of full-length proteins through a nanopore
The electrical current blockade of a peptide or protein threading through a nanopore can be
used as a fingerprint of the molecule in biosensor applications. However, threading of full …
used as a fingerprint of the molecule in biosensor applications. However, threading of full …
Protein transport through a narrow solid-state nanopore at high voltage: experiments and theory
We report experimentally the transport of an unfolded protein through a narrow solid-state
nanopore of 3 nm diameter as a function of applied voltage. The random coil polypeptide …
nanopore of 3 nm diameter as a function of applied voltage. The random coil polypeptide …
Theory of capture rate in polymer translocation
M Muthukumar - The Journal of chemical physics, 2010 - pubs.aip.org
The translocation of macromolecules through a nanopore requires the im**ement of the
molecules at the pore followed by threading through the pore. While most of the discussion …
molecules at the pore followed by threading through the pore. While most of the discussion …
Wild type, mutant protein unfolding and phase transition detected by single-nanopore recording
Understanding protein folding remains a challenge. A difficulty is to investigate
experimentally all the conformations in the energy landscape. Only single molecule …
experimentally all the conformations in the energy landscape. Only single molecule …
Insights into protein sequencing with an α-Hemolysin nanopore by atomistic simulations
Single molecule protein sequencing would represent a disruptive burst in proteomic
research with important biomedical impacts. Due to their success in DNA sequencing …
research with important biomedical impacts. Due to their success in DNA sequencing …
Placement of oppositely charged aminoacids at a polypeptide termini determines the voltage-controlled braking of polymer transport through nanometer-scale pores
Protein and solid-state nanometer-scale pores are being developed for the detection,
analysis and manipulation of single molecules. In the simplest embodiment, the entry of a …
analysis and manipulation of single molecules. In the simplest embodiment, the entry of a …
On the distribution of DNA translocation times in solid-state nanopores: an analysis using Schrödinger's first-passage-time theory
In this short paper, a correction is made to the recently proposed solution of Li and Talaga to
a 1D biased diffusion model for linear DNA translocation, and a new analysis will be given to …
a 1D biased diffusion model for linear DNA translocation, and a new analysis will be given to …
Nanopore sensors for single molecular protein detection: Research progress based on computer simulations
G Hu, H Yan, G **, Z Gao, Z Wu, Z Lu… - IET …, 2023 - Wiley Online Library
As biological macromolecules, proteins are involved in important cellular functions ranging
from DNA replication and biosynthesis to metabolic signalling and environmental sensing …
from DNA replication and biosynthesis to metabolic signalling and environmental sensing …
Periodic forces trigger knot untying during translocation of knotted proteins
P Szymczak - Scientific reports, 2016 - nature.com
Proteins need to be unfolded when translocated through the pores in mitochondrial and
other cellular membranes. Knotted proteins, however, might get stuck during this process …
other cellular membranes. Knotted proteins, however, might get stuck during this process …