Assessing genomic diversity and signatures of selection in Jiaxian Red cattle using whole-genome sequencing data

X **a, S Zhang, H Zhang, Z Zhang, N Chen, Z Li, H Sun… - BMC genomics, 2021 - Springer
Background Native cattle breeds are an important source of genetic variation because they
might carry alleles that enable them to adapt to local environment and tough feeding …

Trajectory of livestock genomics in South Asia: a comprehensive review

M Panigrahi, H Kumar, KA Saravanan, D Rajawat… - Gene, 2022 - Elsevier
Livestock plays a central role in sustaining human livelihood in South Asia. There are
numerous and distinct livestock species in South Asian countries. Several of them have …

Widespread introgression across a phylogeny of 155 Drosophila genomes

A Suvorov, BY Kim, J Wang, EE Armstrong, D Peede… - Current Biology, 2022 - cell.com
Genome-scale sequence data have invigorated the study of hybridization and introgression,
particularly in animals. However, outside of a few notable cases, we lack systematic tests for …

863 genomes reveal the origin and domestication of chicken

MS Wang, M Thakur, MS Peng, YU Jiang, LAF Frantz… - Cell research, 2020 - nature.com
Despite the substantial role that chickens have played in human societies across the world,
both the geographic and temporal origins of their domestication remain controversial. To …

[PDF][PDF] Whole-genome resequencing of worldwide wild and domestic sheep elucidates genetic diversity, introgression, and agronomically important loci

FH Lv, YH Cao, GJ Liu, LY Luo, R Lu… - Molecular biology …, 2022 - academic.oup.com
Domestic sheep and their wild relatives harbor substantial genetic variants that can form the
backbone of molecular breeding, but their genome landscapes remain understudied. Here …

Ancient cattle genomics, origins, and rapid turnover in the Fertile Crescent

MP Verdugo, VE Mullin, A Scheu, V Mattiangeli… - Science, 2019 - science.org
Genome-wide analysis of 67 ancient Near Eastern cattle, Bos taurus, remains reveals
regional variation that has since been obscured by admixture in modern populations …

Assembly of a pangenome for global cattle reveals missing sequences and novel structural variations, providing new insights into their diversity and evolutionary …

Y Zhou, L Yang, X Han, J Han, Y Hu, F Li… - Genome …, 2022 - genome.cshlp.org
A cattle pangenome representation was created based on the genome sequences of 898
cattle representing 57 breeds. The pangenome identified 83 Mb of sequence not found in …

Global genetic diversity, introgression, and evolutionary adaptation of indicine cattle revealed by whole genome sequencing

N Chen, X **a, Q Hanif, F Zhang, R Dang… - Nature …, 2023 - nature.com
Indicine cattle, also referred to as zebu (Bos taurus indicus), play a central role in pastoral
communities across a wide range of agro-ecosystems, from extremely hot semiarid regions …

Evidence for early domestic yak, taurine cattle, and their hybrids on the Tibetan Plateau

N Chen, Z Zhang, J Hou, J Chen, X Gao, L Tang… - Science …, 2023 - science.org
Domestic yak, cattle, and their hybrids are fundamental to herder survival at high altitudes on
the Tibetan Plateau. However, little is known about their history. Bos remains are uncommon …

Evolutionary origin of genomic structural variations in domestic yaks

X Liu, W Liu, JA Lenstra, Z Zheng, X Wu, J Yang… - Nature …, 2023 - nature.com
Yak has been subject to natural selection, human domestication and interspecific
introgression during its evolution. However, genetic variants favored by each of these …