Genome-wide genetic marker discovery and genoty** using next-generation sequencing

JW Davey, PA Hohenlohe, PD Etter, JQ Boone… - Nature Reviews …, 2011 - nature.com
The advent of next-generation sequencing (NGS) has revolutionized genomic and
transcriptomic approaches to biology. These new sequencing tools are also valuable for the …

Development and use of molecular markers: past and present

A Grover, PC Sharma - Critical reviews in biotechnology, 2016 - Taylor & Francis
Molecular markers, due to their stability, cost-effectiveness and ease of use provide an
immensely popular tool for a variety of applications including genome map**, gene …

An improved pig reference genome sequence to enable pig genetics and genomics research

A Warr, N Affara, B Aken, H Beiki, DM Bickhart… - …, 2020 - academic.oup.com
Abstract Background The domestic pig (Sus scrofa) is important both as a food source and
as a biomedical model given its similarity in size, anatomy, physiology, metabolism …

Discrimination of single-point mutations in unamplified genomic DNA via Cas9 immobilized on a graphene field-effect transistor

S Balderston, JJ Taulbee, E Celaya, K Fung… - Nature Biomedical …, 2021 - nature.com
Simple and fast methods for the detection of target genes with single-nucleotide specificity
could open up genetic research and diagnostics beyond laboratory settings. We recently …

The pig: a model for human infectious diseases

F Meurens, A Summerfield, H Nauwynck, L Saif… - Trends in …, 2012 - cell.com
An animal model to study human infectious diseases should accurately reproduce the
various aspects of disease. Domestic pigs (Sus scrofa domesticus) are closely related to …

Sequencing technologies and genome sequencing

CS Pareek, R Smoczynski, A Tretyn - Journal of applied genetics, 2011 - Springer
The high-throughput-next generation sequencing (HT-NGS) technologies are currently the
hottest topic in the field of human and animals genomics researches, which can produce …

Switchgrass genomic diversity, ploidy, and evolution: novel insights from a network-based SNP discovery protocol

F Lu, AE Lipka, J Glaubitz, R Elshire, JH Cherney… - PLoS …, 2013 - journals.plos.org
Switchgrass (Panicum virgatum L.) is a perennial grass that has been designated as an
herbaceous model biofuel crop for the United States of America. To facilitate accelerated …

Development and evaluation of SoySNP50K, a high-density genoty** array for soybean

Q Song, DL Hyten, G Jia, CV Quigley, EW Fickus… - PloS one, 2013 - journals.plos.org
The objective of this research was to identify single nucleotide polymorphisms (SNPs) and to
develop an Illumina Infinium BeadChip that contained over 50,000 SNPs from soybean …

Strong signatures of selection in the domestic pig genome

CJ Rubin, HJ Megens, AM Barrio… - Proceedings of the …, 2012 - National Acad Sciences
Domestication of wild boar (Sus scrofa) and subsequent selection have resulted in dramatic
phenotypic changes in domestic pigs for a number of traits, including behavior, body …

Applications of next-generation sequencing to phylogeography and phylogenetics

JE McCormack, SM Hird, AJ Zellmer… - Molecular phylogenetics …, 2013 - Elsevier
This is a time of unprecedented transition in DNA sequencing technologies. Next-generation
sequencing (NGS) clearly holds promise for fast and cost-effective generation of multilocus …