[HTML][HTML] Recombination in bacterial genomes: evolutionary trends

AE Shikov, IA Savina, AA Nizhnikov, KS Antonets - Toxins, 2023 - mdpi.com
Bacterial organisms have undergone homologous recombination (HR) and horizontal gene
transfer (HGT) multiple times during their history. These processes could increase fitness to …

Nationwide genomic atlas of soil-dwelling Listeria reveals effects of selection and population ecology on pangenome evolution

J Liao, X Guo, DL Weller, S Pollak, DH Buckley… - Nature …, 2021 - nature.com
Natural bacterial populations can display enormous genomic diversity, primarily in the form
of gene content variation caused by the frequent exchange of DNA with the local …

Monitoring the Microevolution of Salmonella enterica in Healthy Dairy Cattle Populations at the Individual Farm Level Using Whole-Genome Sequencing

LM Carroll, AJ Buehler, A Gaballa, JD Siler… - Frontiers in …, 2021 - frontiersin.org
Livestock represent a possible reservoir for facilitating the transmission of the zoonotic
foodborne pathogen Salmonella enterica to humans; there is also concern that strains can …

Comparative genomics unveils extensive genomic variation between populations of Listeria species in natural and food-associated environments

J Liao, X Guo, S Li, SMB Anupoju… - ISME …, 2023 - academic.oup.com
Comprehending bacterial genomic variation linked to distinct environments can yield novel
insights into mechanisms underlying differential adaptation and transmission of microbes …

Identification and salt tolerance evaluation of endophyte fungi isolates from halophyte plants

B Jalili, H Bagheri, S Azadi, J Soltani - International journal of …, 2020 - Springer
The harsh environments of desert areas lead to natural selection of resistant creatures with
obvious characteristics. This experiment looked for salt-tolerant fungi from native halophyte …

Phylogenomic analysis of Salmonella Indiana ST17, an emerging MDR clonal group in China

RY Sun, WY Guo, JX Zhang, MG Wang… - Journal of …, 2022 - academic.oup.com
Objectives To reconstruct the genomic epidemiology and evolution of MDR Salmonella
Indiana in China. Methods A total of 108 Salmonella Indiana strains were collected from …

Genome characteristics of clinical Salmonella enterica population from a state public health laboratory, New Hampshire, USA, 2017–2020

MR Turcotte, JT Smith, J Li, X Zhang, KL Wolfe, F Gao… - BMC genomics, 2022 - Springer
Background The implementation of whole genome sequencing (WGS) by PulseNet, the
molecular subty** network for foodborne diseases, has transformed surveillance …

Patterns of antimicrobial resistance in Salmonella isolates from fattening pigs in Spain

KT Teng, M Aerts, S Jaspers, M Ugarte-Ruiz… - BMC veterinary …, 2022 - Springer
Background Swine are considered a major source of foodborne salmonellosis, a public
health issue further complicated by the circulation of multidrug-resistant Salmonella strains …

Genomic analysis of Salmonella isolated from canal water in Bangkok, Thailand

J Toyting, N Nuanmuang, F Utrarachkij… - Microbiology …, 2024 - journals.asm.org
Antimicrobial resistance (AMR) poses an escalating global public health threat. Canals are
essential in Thailand, including the capital city, Bangkok, as agricultural and daily water …

Comparative genomics reveals different population structures associated with host and geographic origin in antimicrobial‐resistant Salmonella enterica

J Liao, RH Orsi, LM Carroll… - Environmental …, 2020 - Wiley Online Library
Genetic variation in a pathogen, including the causative agent of salmonellosis, Salmonella
enterica, can occur as a result of eco‐evolutionary forces triggered by dissimilarities of …