[HTML][HTML] Metagenomics reshapes the concepts of RNA virus evolution by revealing extensive horizontal virus transfer

VV Dolja, EV Koonin - Virus research, 2018 - Elsevier
Virus metagenomics is a young research filed but it has already transformed our
understanding of virus diversity and evolution, and illuminated at a new level the …

Expanding the RNA virosphere by unbiased metagenomics

YZ Zhang, YM Chen, W Wang, XC Qin… - Annual Review of …, 2019 - annualreviews.org
Although viruses comprise the most abundant genetic material in the biosphere, to date only
several thousand virus species have been formally defined. Such a limited perspective on …

Cryptic and abundant marine viruses at the evolutionary origins of Earth's RNA virome

AA Zayed, JM Wainaina, G Dominguez-Huerta… - Science, 2022 - science.org
Whereas DNA viruses are known to be abundant, diverse, and commonly key ecosystem
players, RNA viruses are insufficiently studied outside disease settings. In this study, we …

Marine DNA viral macro-and microdiversity from pole to pole

AC Gregory, AA Zayed, N Conceição-Neto… - Cell, 2019 - cell.com
Microbes drive most ecosystems and are modulated by viruses that impact their lifespan,
gene flow, and metabolic outputs. However, ecosystem-level impacts of viral community …

Diversity and ecological footprint of Global Ocean RNA viruses

G Dominguez-Huerta, AA Zayed, JM Wainaina, J Guo… - Science, 2022 - science.org
DNA viruses are increasingly recognized as influencing marine microbes and microbe-
mediated biogeochemical cycling. However, little is known about global marine RNA virus …

Doubling of the known set of RNA viruses by metagenomic analysis of an aquatic virome

YI Wolf, S Silas, Y Wang, S Wu, M Bocek… - Nature …, 2020 - nature.com
RNA viruses in aquatic environments remain poorly studied. Here, we analysed the RNA
virome from approximately 10 l water from Yangshan Deep-Water Harbour near the Yangtze …

Identification of multiple potential viral diseases in a large urban center using wastewater surveillance

C McCall, H Wu, B Miyani, I Xagoraraki - Water research, 2020 - Elsevier
Viruses are linked to a multitude of human illnesses and can disseminate widely in
urbanized environments causing global adverse impacts on communities and healthcare …

Novel virus identification through metagenomics: a systematic review

C Bassi, P Guerriero, M Pierantoni, E Callegari… - Life, 2022 - mdpi.com
Metagenomic Next Generation Sequencing (mNGS) allows the evaluation of complex
microbial communities, avoiding isolation and cultivation of each microbial species, and …

Virus-host relationships of marine single-celled eukaryotes resolved from metatranscriptomics

M Moniruzzaman, LL Wurch, H Alexander… - Nature …, 2017 - nature.com
Establishing virus–host relationships has historically relied on culture-dependent
approaches. Here we report on the use of marine metatranscriptomics to probe virus–host …

[HTML][HTML] Description and initial characterization of metatranscriptomic nidovirus-like genomes from the proposed new family Abyssoviridae, and from a sister group to …

K Bukhari, G Mulley, AA Gulyaeva, L Zhao, G Shu… - Virology, 2018 - Elsevier
Transcriptomics has the potential to discover new RNA virus genomes by sequencing total
intracellular RNA pools. In this study, we have searched publicly available transcriptomes for …