oposSOM: R-package for high-dimensional portraying of genome-wide expression landscapes on bioconductor
H Löffler-Wirth, M Kalcher, H Binder - Bioinformatics, 2015 - academic.oup.com
Motivation: Comprehensive analysis of genome-wide molecular data challenges
bioinformatics methodology in terms of intuitive visualization with single-sample resolution …
bioinformatics methodology in terms of intuitive visualization with single-sample resolution …
Integrated multi-omics maps of lower-grade gliomas
Simple Summary Data from multiple omics domains were increasingly generated in large-
scale tumour studies to enhance our understanding of molecular mechanisms of cancer. We …
scale tumour studies to enhance our understanding of molecular mechanisms of cancer. We …
Visual comparative omics of fungi for plant biomass deconstruction
Wood-decay fungi contain the cellular mechanisms to decompose such plant cell wall
components as cellulose, hemicellulose, and lignin. A multi-omics approach to the …
components as cellulose, hemicellulose, and lignin. A multi-omics approach to the …
The transcriptome and methylome of the develo** and aging brain and their relations to gliomas and psychological disorders
Mutually linked expression and methylation dynamics in the brain govern genome
regulation over the whole lifetime with an impact on cognition, psychological disorders, and …
regulation over the whole lifetime with an impact on cognition, psychological disorders, and …
Combined SOM-portrayal of gene expression and DNA methylation landscapes disentangles modes of epigenetic regulation in glioblastoma
Aim: We present here a novel method that enables unraveling the interplay between gene
expression and DNA methylation in complex diseases such as cancer. Materials & methods …
expression and DNA methylation in complex diseases such as cancer. Materials & methods …
Development of tissue-specific age predictors using DNA methylation data
H Choi, S Joe, H Nam - Genes, 2019 - mdpi.com
DNA methylation patterns have been shown to change throughout the normal aging
process. Several studies have found epigenetic aging markers using age predictors, but …
process. Several studies have found epigenetic aging markers using age predictors, but …
Pattern analysis of genetics and genomics: a survey of the state-of-art
The endless enhancement and decreasing charges of a complete human genome have
given rise to fast acceptance of genetic and genomic information at both research institutions …
given rise to fast acceptance of genetic and genomic information at both research institutions …
Analysis of large-scale OMIC data using self organizing maps
H Binder, H Wirth - … of Information Science and Technology, Third …, 2015 - igi-global.com
The development and decaying costs for highthroughput bio-molecular analytics give rise to
huge and still increasing amounts of data collected in the context of modern 'omics' realms …
huge and still increasing amounts of data collected in the context of modern 'omics' realms …
Personalized disease phenotypes from massive OMICs data
Application of new high-throughput technologies in molecular medicine collects massive
data for hundreds to thousands of persons in large cohort studies by characterizing the …
data for hundreds to thousands of persons in large cohort studies by characterizing the …
On the cooperation between epigenetics and transcription factor networks in the specification of tissue stem cells
It is generally accepted that epigenetic modifications, such as DNA and histone
methylations, affect transcription and that a gene's transcription feeds back on its epigenetic …
methylations, affect transcription and that a gene's transcription feeds back on its epigenetic …