Bacteria and archaea on Earth and their abundance in biofilms

HC Flemming, S Wuertz - Nature Reviews Microbiology, 2019 - nature.com
Biofilms are a form of collective life with emergent properties that confer many advantages
on their inhabitants, and they represent a much higher level of organization than single cells …

Zooming in on the phycosphere: the ecological interface for phytoplankton–bacteria relationships

JR Seymour, SA Amin, JB Raina, R Stocker - Nature microbiology, 2017 - nature.com
By controlling nutrient cycling and biomass production at the base of the food web,
interactions between phytoplankton and bacteria represent a fundamental ecological …

Models predict planned phosphorus load reduction will make Lake Erie more toxic

FL Hellweger, RM Martin, F Eigemann, DJ Smith… - Science, 2022 - science.org
Harmful cyanobacteria are a global environmental problem, yet we lack actionable
understanding of toxigenic versus nontoxigenic strain ecology and toxin production. We …

Hydrogen peroxide metabolism and functions in plants

N Smirnoff, D Arnaud - New phytologist, 2019 - Wiley Online Library
Contents Summary 1197 I. Introduction 1198 II. Measurement and imaging of H2O2 1198 III.
H2O2 and O2·− toxicity 1199 IV. Production of H2O2: enzymes and subcellular locations …

Marine microbial community dynamics and their ecological interpretation

JA Fuhrman, JA Cram, DM Needham - Nature Reviews Microbiology, 2015 - nature.com
Recent advances in studying the dynamics of marine microbial communities have shown
that the composition of these communities follows predictable patterns and involves complex …

Analysing microbial community composition through amplicon sequencing: from sampling to hypothesis testing

LW Hugerth, AF Andersson - Frontiers in microbiology, 2017 - frontiersin.org
Microbial ecology as a scientific field is fundamentally driven by technological advance. The
past decade's revolution in DNA sequencing cost and throughput has made it possible for …

Implications of streamlining theory for microbial ecology

SJ Giovannoni, J Cameron Thrash… - The ISME …, 2014 - academic.oup.com
Whether a small cell, a small genome or a minimal set of chemical reactions with self-
replicating properties, simplicity is beguiling. As Leonardo da Vinci reportedly said,'simplicity …

Prochlorococcus: the structure and function of collective diversity

SJ Biller, PM Berube, D Lindell… - Nature Reviews …, 2015 - nature.com
The marine cyanobacterium Prochlorococcus is the smallest and most abundant
photosynthetic organism on Earth. In this Review, we summarize our understanding of the …

Growing unculturable bacteria

EJ Stewart - Journal of bacteriology, 2012 - Am Soc Microbiol
The bacteria that can be grown in the laboratory are only a small fraction of the total diversity
that exists in nature. At all levels of bacterial phylogeny, uncultured clades that do not grow …

The Black Queen Hypothesis: evolution of dependencies through adaptive gene loss

JJ Morris, RE Lenski, ER Zinser - MBio, 2012 - Am Soc Microbiol
Reductive genomic evolution, driven by genetic drift, is common in endosymbiotic bacteria.
Genome reduction is less common in free-living organisms, but it has occurred in the …