On the dependency of cellular protein levels on mRNA abundance
The question of how genomic information is expressed to determine phenotypes is of central
importance for basic and translational life science research and has been studied by …
importance for basic and translational life science research and has been studied by …
Next-generation proteomics: towards an integrative view of proteome dynamics
Next-generation sequencing allows the analysis of genomes, including those representing
disease states. However, the causes of most disorders are multifactorial, and systems-level …
disease states. However, the causes of most disorders are multifactorial, and systems-level …
[HTML][HTML] A proximal-to-distal survey of healthy adult human small intestine and colon epithelium by single-cell transcriptomics
Background & Aims Single-cell transcriptomics offer unprecedented resolution of tissue
function at the cellular level, yet studies analyzing healthy adult human small intestine and …
function at the cellular level, yet studies analyzing healthy adult human small intestine and …
MultiNotch MS3 enables accurate, sensitive, and multiplexed detection of differential expression across cancer cell line proteomes
Multiplexed quantitation via isobaric chemical tags (eg, tandem mass tags (TMT) and
isobaric tags for relative and absolute quantitation (iTRAQ)) has the potential to revolutionize …
isobaric tags for relative and absolute quantitation (iTRAQ)) has the potential to revolutionize …
Global quantification of mammalian gene expression control
B Schwanhäusser, D Busse, N Li, G Dittmar… - Nature, 2011 - nature.com
Gene expression is a multistep process that involves the transcription, translation and
turnover of messenger RNAs and proteins. Although it is one of the most fundamental …
turnover of messenger RNAs and proteins. Although it is one of the most fundamental …
The Lgr5 intestinal stem cell signature: robust expression of proposed quiescent '+ 4'cell markers
Two types of stem cells are currently defined in small intestinal crypts: cycling crypt base
columnar (CBC) cells and quiescent '+ 4'cells. Here, we combine transcriptomics with …
columnar (CBC) cells and quiescent '+ 4'cells. Here, we combine transcriptomics with …
The nature of embryonic stem cells
Mouse embryonic stem (ES) cells perpetuate in vitro the broad developmental potential of
naïve founder cells in the preimplantation embryo. ES cells self-renew relentlessly in culture …
naïve founder cells in the preimplantation embryo. ES cells self-renew relentlessly in culture …
[HTML][HTML] Densely interconnected transcriptional circuits control cell states in human hematopoiesis
Though many individual transcription factors are known to regulate hematopoietic
differentiation, major aspects of the global architecture of hematopoiesis remain unknown …
differentiation, major aspects of the global architecture of hematopoiesis remain unknown …
The RNA-binding protein repertoire of embryonic stem cells
RNA-binding proteins (RBPs) have essential roles in RNA-mediated gene regulation, and
yet annotation of RBPs is limited mainly to those with known RNA-binding domains. To …
yet annotation of RBPs is limited mainly to those with known RNA-binding domains. To …
Defining an essential transcription factor program for naive pluripotency
The gene regulatory circuitry through which pluripotent embryonic stem (ES) cells choose
between self-renewal and differentiation appears vast and has yet to be distilled into an …
between self-renewal and differentiation appears vast and has yet to be distilled into an …