Multivariate phylogenetic comparative methods: evaluations, comparisons, and recommendations
Recent years have seen increased interest in phylogenetic comparative analyses of
multivariate data sets, but to date the varied proposed approaches have not been …
multivariate data sets, but to date the varied proposed approaches have not been …
Phylogenetic niche conservatism and the evolutionary basis of ecological speciation
Phylogenetic niche conservatism (PNC) typically refers to the tendency of closely related
species to be more similar to each other in terms of niche than they are to more distant …
species to be more similar to each other in terms of niche than they are to more distant …
[BOOK][B] Joint species distribution modelling: With applications in R
O Ovaskainen, N Abrego - 2020 - books.google.com
Joint species distribution modelling (JSDM) is a fast-develo** field and promises to
revolutionise how data on ecological communities are analysed and interpreted. Written for …
revolutionise how data on ecological communities are analysed and interpreted. Written for …
A linear-time algorithm for Gaussian and non-Gaussian trait evolution models
We developed a linear-time algorithm applicable to a large class of trait evolution models,
for efficient likelihood calculations and parameter inference on very large trees. Our …
for efficient likelihood calculations and parameter inference on very large trees. Our …
Detecting hidden diversification shifts in models of trait-dependent speciation and extinction
The distribution of diversity can vary considerably from clade to clade. Attempts to
understand these patterns often employ state-dependent speciation and extinction models …
understand these patterns often employ state-dependent speciation and extinction models …
mvmorph: an r package for fitting multivariate evolutionary models to morphometric data
We present mvmorph, a package of multivariate phylogenetic comparative methods for the r
statistical environment. mvmorph is freely available on the cran package repository …
statistical environment. mvmorph is freely available on the cran package repository …
Rates of dinosaur body mass evolution indicate 170 million years of sustained ecological innovation on the avian stem lineage
Large-scale adaptive radiations might explain the runaway success of a minority of extant
vertebrate clades. This hypothesis predicts, among other things, rapid rates of morphological …
vertebrate clades. This hypothesis predicts, among other things, rapid rates of morphological …
Rethinking phylogenetic comparative methods
As a result of the process of descent with modification, closely related species tend to be
similar to one another in a myriad different ways. In statistical terms, this means that traits …
similar to one another in a myriad different ways. In statistical terms, this means that traits …
A cautionary note on the use of Ornstein Uhlenbeck models in macroevolutionary studies
Phylogenetic comparative methods are increasingly used to give new insights into the
dynamics of trait evolution in deep time. For continuous traits the core of these methods is a …
dynamics of trait evolution in deep time. For continuous traits the core of these methods is a …
Niche filling slows the diversification of Himalayan songbirds
Speciation generally involves a three-step process—range expansion, range fragmentation
and the development of reproductive isolation between spatially separated populations …
and the development of reproductive isolation between spatially separated populations …