Deciphering breast cancer: from biology to the clinic

E Nolan, GJ Lindeman, JE Visvader - Cell, 2023 - cell.com
Breast cancer remains a leading cause of cancer-related mortality in women, reflecting
profound disease heterogeneity, metastasis, and therapeutic resistance. Over the last …

Cancer cell plasticity during tumor progression, metastasis and response to therapy

A Pérez-González, K Bévant, C Blanpain - Nature cancer, 2023 - nature.com
Cell plasticity represents the ability of cells to be reprogrammed and to change their fate and
identity, enabling homeostasis restoration and tissue regeneration following damage. Cell …

High resolution map** of the tumor microenvironment using integrated single-cell, spatial and in situ analysis

A Janesick, R Shelansky, AD Gottscho… - Nature …, 2023 - nature.com
Single-cell and spatial technologies that profile gene expression across a whole tissue are
revolutionizing the resolution of molecular states in clinical samples. Current commercially …

Towards targeting the breast cancer immune microenvironment

MA Harris, P Savas, B Virassamy… - Nature Reviews …, 2024 - nature.com
The tumour immune microenvironment is shaped by the crosstalk between cancer cells,
immune cells, fibroblasts, endothelial cells and other stromal components. Although the …

Applications of single-cell sequencing in cancer research: progress and perspectives

Y Lei, R Tang, J Xu, W Wang, B Zhang, J Liu… - Journal of hematology & …, 2021 - Springer
Single-cell sequencing, including genomics, transcriptomics, epigenomics, proteomics and
metabolomics sequencing, is a powerful tool to decipher the cellular and molecular …

Deciphering the spatial landscape and plasticity of immunosuppressive fibroblasts in breast cancer

H Croizer, R Mhaidly, Y Kieffer, G Gentric… - Nature …, 2024 - nature.com
Although heterogeneity of FAP+ Cancer-Associated Fibroblasts (CAF) has been described
in breast cancer, their plasticity and spatial distribution remain poorly understood. Here, we …

[HTML][HTML] Evolution of immune and stromal cell states and ecotypes during gastric adenocarcinoma progression

R Wang, S Song, J Qin, K Yoshimura, F Peng, Y Chu… - Cancer Cell, 2023 - cell.com
Understanding tumor microenvironment (TME) reprogramming in gastric adenocarcinoma
(GAC) progression may uncover novel therapeutic targets. Here, we performed single-cell …

Unsupervised spatially embedded deep representation of spatial transcriptomics

H Xu, H Fu, Y Long, KS Ang, R Sethi, K Chong, M Li… - Genome Medicine, 2024 - Springer
Optimal integration of transcriptomics data and associated spatial information is essential
towards fully exploiting spatial transcriptomics to dissect tissue heterogeneity and map out …

High resolution map** of the breast cancer tumor microenvironment using integrated single cell, spatial and in situ analysis of FFPE tissue

A Janesick, R Shelansky, A Gottscho, F Wagner… - Biorxiv, 2022 - biorxiv.org
Single cell and spatial technologies that profile gene expression across a whole tissue are
revolutionizing the resolution of molecular states in clinical tissue samples. Commercially …

[HTML][HTML] A human breast atlas integrating single-cell proteomics and transcriptomics

GK Gray, CMC Li, JM Rosenbluth, LM Selfors… - Developmental cell, 2022 - cell.com
The breast is a dynamic organ whose response to physiological and pathophysiological
conditions alters its disease susceptibility, yet the specific effects of these clinical variables …