Innovations to culturing the uncultured microbial majority
Despite the surge of microbial genome data, experimental testing is important to confirm
inferences about the cell biology, ecological roles and evolution of microorganisms. As the …
inferences about the cell biology, ecological roles and evolution of microorganisms. As the …
Trophic interactions and the drivers of microbial community assembly
Despite numerous surveys of gene and species content in heterotrophic microbial
communities, such as those found in animal guts, oceans, or soils, it is still unclear whether …
communities, such as those found in animal guts, oceans, or soils, it is still unclear whether …
Spatial transcriptomics of planktonic and sessile bacterial populations at single-cell resolution
INTRODUCTION Microbial populations display heterogeneous gene expression profiles that
result in phenotypic differences between individual bacteria. This diversity can allow …
result in phenotypic differences between individual bacteria. This diversity can allow …
Raman microspectroscopy for microbiology
Raman microspectroscopy offers microbiologists a rapid and non-destructive technique to
assess the chemical composition of individual live microorganisms in near real time. In this …
assess the chemical composition of individual live microorganisms in near real time. In this …
Prokaryotic taxonomy and nomenclature in the age of big sequence data
The classification of life forms into a hierarchical system (taxonomy) and the application of
names to this hierarchy (nomenclature) is at a turning point in microbiology. The …
names to this hierarchy (nomenclature) is at a turning point in microbiology. The …
Raman spectroscopy in cell biology and microbiology
G Pezzotti - Journal of Raman Spectroscopy, 2021 - Wiley Online Library
The Raman spectrum of living cells and microorganisms contains highly specific fingerprint‐
like signatures, useful in unequivocally identifying different species and interpreting …
like signatures, useful in unequivocally identifying different species and interpreting …
A review of methods to determine viability, vitality, and metabolic rates in microbiology
Viability and metabolic assays are commonly used as proxies to assess the overall
metabolism of microorganisms. The variety of these assays combined with little information …
metabolism of microorganisms. The variety of these assays combined with little information …
Bond-selective imaging by optically sensing the mid-infrared photothermal effect
Mid-infrared (IR) spectroscopic imaging using inherent vibrational contrast has been broadly
used as a powerful analytical tool for sample identification and characterization. However …
used as a powerful analytical tool for sample identification and characterization. However …
Methyl-based methanogenesis: an ecological and genomic review
Methyl-based methanogenesis is one of three broad categories of archaeal anaerobic
methanogenesis, including both the methyl dismutation (methylotrophic) pathway and the …
methanogenesis, including both the methyl dismutation (methylotrophic) pathway and the …
Visualization of metabolites and microbes at high spatial resolution using MALDI mass spectrometry imaging and in situ fluorescence labeling
Label-free molecular imaging techniques such as matrix-assisted laser desorption ionization
mass spectrometry imaging (MALDI-MSI) enable the direct and simultaneous map** of …
mass spectrometry imaging (MALDI-MSI) enable the direct and simultaneous map** of …