Genome-wide association analysis identifies novel loci for chronotype in 100,420 individuals from the UK Biobank

JM Lane, I Vlasac, SG Anderson, SD Kyle… - Nature …, 2016 - nature.com
Our sleep timing preference, or chronotype, is a manifestation of our internal biological
clock. Variation in chronotype has been linked to sleep disorders, cognitive and physical …

Cohort profile: the Nijmegen biomedical study (NBS)

TE Galesloot, SH Vermeulen… - International journal …, 2017 - academic.oup.com
The Nijmegen Biomedical Study (NBS) is a population-based study that was initiated (by LK
and AV) in 2000 in the municipality of Nijmegen (150 000 inhabitants) in the eastern part of …

Depression genetic risk score is associated with anhedonia-related markers across units of analysis

G Guffanti, P Kumar, R Admon, MT Treadway… - Translational …, 2019 - nature.com
Investigations of pathophysiological mechanisms implicated in vulnerability to depression
have been negatively impacted by the significant heterogeneity characteristic of psychiatric …

[HTML][HTML] A multi-phenotype genome-wide association study of clades causing tuberculosis in a Ghanaian-and South African cohort

SJ Müller, H Schurz, G Tromp, GD van Der Spuy… - Genomics, 2021 - Elsevier
Despite decades of research and advancements in diagnostics and treatment, tuberculosis
remains a major public health concern. New computational methods are needed to …

Gimpute: an efficient genetic data imputation pipeline

J Chen, D Lippold, J Frank, W Rayner… - …, 2019 - academic.oup.com
Motivation Genotype imputation is essential for genome-wide association studies (GWAS) to
retrieve information of untyped variants and facilitate comparability across studies. However …

Identification of analytical factors affecting complex proteomics profiles acquired in a factorial design study with analysis of variance: simultaneous component analysis

V Mitra, N Govorukhina, G Zwanenburg… - Analytical …, 2016 - ACS Publications
Complex shotgun proteomics peptide profiles obtained in quantitative differential protein
expression studies, such as in biomarker discovery, may be affected by multiple …

Map** the genetics of neuropsychological traits to the molecular network of the human brain using a data integrative approach

A Yousaf, E Duketis, T Jarczok, M Sachse, M Biscaldi… - Biorxiv, 2018 - biorxiv.org
Motivation Complex neuropsychiatric conditions including autism spectrum disorders are
among the most heritable neurodevelopmental disorders with distinct profiles of …

On the development of an open and collaborative bioinformatics research environment

A Kanterakis, N Karacapilidis, L Koumakis… - Procedia Computer …, 2018 - Elsevier
This paper reports on the development of a self-sustaining and community-responsive
platform that streamlines the wealth of available open Bioinformatics resources to accelerate …

[PDF][PDF] Towards Reproducible Bioinformatics: The OpenBio-C Scientific Workflow Environemnt

L Koumakis, G Iatraki, N Kanakaris, G Potamias… - nkanak.github.io
The highly competitive environment of post-genomics biomedical research is pushing
towards the production of highly qualified results and their utilization in clinical practice. Due …

Functional and clinical translation of asthma and allergy associated genetic variants in IL33 and IL1RL1

M Ketelaar - 2021 - research.rug.nl
In this thesis we aimed to unravel novel mechanisms underlying asthma and allergy, and to
translate this to clinical application. The focus is on 2 genes: Interleukin 33 (IL33) and …