Characterization of lipid–protein interactions and lipid-mediated modulation of membrane protein function through molecular simulation

MP Muller, T Jiang, C Sun, M Lihan, S Pant… - Chemical …, 2019 - ACS Publications
The cellular membrane constitutes one of the most fundamental compartments of a living
cell, where key processes such as selective transport of material and exchange of …

On the conformational dynamics of β-amyloid forming peptides: A computational perspective

KM Saravanan, H Zhang, H Zhang, W **… - … in Bioengineering and …, 2020 - frontiersin.org
Understanding the conformational dynamics of proteins and peptides involved in important
functions is still a difficult task in computational structural biology. Because such …

Effect of Terahertz Waves on the Structure of the Aβ42 Monomer, Dimer, and Protofibril: Insights from Molecular Dynamics Simulations

C Chen, ZS Yan, YQ Ma, HM Ding - ACS Chemical Neuroscience, 2023 - ACS Publications
Amyloid-β (Aβ) and its assemblies play important roles in the pathogenesis of Alzheimer's
disease (AD). Recent studies conducted by experimental and computational researchers …

Effect of electric field on α-synuclein fibrils: Revealed by molecular dynamics simulations

J Razzokov, S Fazliev, M Makhkamov… - International Journal of …, 2023 - mdpi.com
The self-association of amylogenic proteins to the fibril form is considered a pivotal factor in
the pathogenesis of neurodegenerative diseases, including Parkinson's disease (PD). PD …

Molecular dynamics simulations explore effects of electric field orientations on spike proteins of SARS-CoV-2 virions

Z Kuang, J Luginsland, RJ Thomas, PB Dennis… - Scientific Reports, 2022 - nature.com
Emergence of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and its
current worldwide spread have caused a pandemic of acute respiratory disease COVID-19 …

Invasive and non-invasive therapies for Alzheimer's disease and other amyloidosis

G Pandey, V Ramakrishnan - Biophysical Reviews, 2020 - Springer
Advancements in medical science have facilitated in extending human lives. The increased
life expectancy, though, has come at a cost. The cases of an aging population suffering from …

Electric field disruption of amyloid aggregation: potential noninvasive therapy for Alzheimer's disease

J Saikia, G Pandey, S Sasidharan… - ACS chemical …, 2019 - ACS Publications
The aggregation of β-amyloid peptides is a key event in the formative stages of Alzheimer's
disease. Promoting folding and inhibiting aggregation was reported as an effective strategy …

Electromagnetic bioeffects: a multiscale molecular simulation perspective

BB Noble, N Todorova, I Yarovsky - Physical Chemistry Chemical …, 2022 - pubs.rsc.org
Electromagnetic bioeffects remain an enigma from both the experimental and theoretical
perspectives despite the ubiquitous presence of related technologies in contemporary life …

Elucidating the effect of static electric field on amyloid beta 1–42 supramolecular assembly

S Muscat, F Stojceski, A Danani - Journal of Molecular Graphics and …, 2020 - Elsevier
Amyloid-β (Aβ) aggregation is recognized to be a key toxic factor in the pathogenesis of
Alzheimer disease, which is the most common progressive neurodegenerative disorder. In …

Impact of Amidation on Aβ25–35 Aggregation

JCE Etaka, Y Lu, W Kang, FR Salsbury Jr… - The Journal of …, 2025 - ACS Publications
Toxic oligomeric species are suspected in the etiology of Alzheimer's disease. The full-
length Aβ42 can be studied by the fragment Aβ25–35 as it retains neurotoxicity. According to …