Revealing the succession of spatial heterogeneity of the microbial community during broad bean paste fermentation

S Zhao, C Niu, Y Wang, Y Zan, F Zheng… - Applied and …, 2023 - Am Soc Microbiol
This study aimed to elaborate the assembly processes and metabolic regulation of the
microbial community under the conditions of environmental factors and artificial intervention …

Direct estimation and inference of higher-level correlations from lower-level measurements with applications in gene-pathway and proteomics studies

Y Wang, H Shi - Biostatistics, 2024 - academic.oup.com
This paper tackles the challenge of estimating correlations between higher-level biological
variables (eg proteins and gene pathways) when only lower-level measurements are …

A Graph Informed Framework Empowering Gene Pathway Discovery and Gene Expression-Assisted Disease Classification

Y Wang, Y Wang, J ** - bioRxiv, 2024 - biorxiv.org
This study introduces a novel graph-informed modeling framework for improving the
statistical analysis of gene expression data, particularly in the context of identifying …

A Graph-Informed Modeling Framework Empowering Gene Pathway Discovery

Y Wang, Y Wang, J ** - bioRxiv, 2024 - pmc.ncbi.nlm.nih.gov
This study introduces a novel graph-informed modeling framework for improving the
statistical analysis of gene expression data, particularly in the context of identifying …

Identifying Effect Modification of Latent Population Characteristics on Risk Factors with a Sparse Varying Coefficient Regression

R Wang, L Fang, Y Wang, J ** - bioRxiv, 2024 - biorxiv.org
Leveraging observational data to understand the associations between risk factors and
disease outcomes and conduct disease risk prediction is a common task in epidemiology …