sdmTMB: an R package for fast, flexible, and user-friendly generalized linear mixed effects models with spatial and spatiotemporal random fields

SC Anderson, EJ Ward, PA English, LAK Barnett - BioRxiv, 2022 - biorxiv.org
Geostatistical data—spatially referenced observations related to some continuous spatial
phenomenon—are ubiquitous in ecology and can reveal ecological processes and inform …

Addressing uncertainty when projecting marine species' distributions under climate change

SC Davies, PL Thompson, C Gomez, J Nephin… - …, 2023 - Wiley Online Library
Species distribution models (SDMs) have been widely used to project terrestrial species'
responses to climate change and are increasingly being used for similar objectives in the …

Comparison of juvenile Pacific salmon abundance, distribution, and body condition between western and eastern Bering Sea using spatiotemporal models

A Somov, EV Farley, EM Yasumiishi, MV McPhee - Fisheries Research, 2024 - Elsevier
Recent changes in climate have had generally negative impacts on salmon stocks in the
eastern and positive effects in the western Bering Sea (WBS). Eastern Bering Sea (EBS) …

Integrating survey and observer data improves the predictions of New Zealand spatio-temporal models

A Grüss, AR Charsley, JT Thorson… - ICES Journal of …, 2023 - academic.oup.com
In many situations, species distribution models need to make use of multiple data sources to
address their objectives. We developed a spatio-temporal modelling framework that …

[HTML][HTML] Seasonal-Spatial Distribution Variations and Predictions of Loliolus beka and Loliolus uyii in the East China Sea Region: Implications from Climate Change …

M Xu, W Feng, Z Liu, Z Li, X Song, H Zhang, C Zhang… - Animals, 2024 - mdpi.com
Simple Summary Loliolus spp., such as Loliolus beka (Sasaki, 1929) and Loliolus uyii
(Wakiya and Ishikawa, 1921), represent a dominant fishing bycatch in the East China Sea …

Guidelines for the use of spatially varying coefficients in species distribution models

JW Doser, M Kéry, SP Saunders… - Global Ecology and …, 2024 - Wiley Online Library
Abstract Aim Species distribution models (SDMs) are increasingly applied across
macroscales using detection‐nondetection data. These models typically assume that a …

Uncovering habitat associations and thresholds—insights for managing breeding waterfowl in Eastern Canada

B Frei, AR Cox, A Brown, ME Dyson, S Meyer… - Landscape …, 2024 - Springer
Context Understanding how habitat influences species abundance is crucial in develo**
ecologically sound wildlife conservation management plans. Exploring habitat associations …

Identifying potential provenances for climate-change adaptation using spatially variable coefficient models

M Wesselkamp, DR Roberts, CF Dormann - BMC Ecology and Evolution, 2024 - Springer
Background Selection of climate-change adapted ecotypes of commercially valuable
species to date relies on DNA-assisted screening followed by growth trials. For trees, such …

Using age compositions derived from spatio-temporal models and acoustic data collected by uncrewed surface vessels to estimate Pacific hake (Merluccius productus …

DG Bolser, AM Berger, D Chu, S de Blois… - Frontiers in Marine …, 2023 - frontiersin.org
Generating biomass-at-age indices for fisheries stock assessments with acoustic data
collected by uncrewed surface vessels (USVs) has been hampered by the need to resolve …

Impacts on population indices if scientific surveys are excluded from marine protected areas

SC Anderson, PA English, KSP Gale… - ICES Journal of …, 2024 - academic.oup.com
Marine protected areas (MPAs) are increasingly common worldwide, typically restricting
fishing activities. However, MPAs may also limit scientific surveys that impact benthic habitat …