Machine and deep learning meet genome-scale metabolic modeling

G Zampieri, S Vijayakumar, E Yaneske… - PLoS computational …, 2019 - journals.plos.org
Omic data analysis is steadily growing as a driver of basic and applied molecular biology
research. Core to the interpretation of complex and heterogeneous biological phenotypes …

Past, present and future of gene feature selection for breast cancer classification–a survey

CL Chowdhary, N Khare, H Patel… - International …, 2022 - inderscienceonline.com
Computational-based analysis of gene expression to evaluate the genetic pattern provides
better breast cancer prediction. It is a challenge to identify these samples correctly and …

A top-r feature selection algorithm for microarray gene expression data

A Sharma, S Imoto, S Miyano - IEEE/ACM Transactions on …, 2011 - ieeexplore.ieee.org
Most of the conventional feature selection algorithms have a drawback whereby a weakly
ranked gene that could perform well in terms of classification accuracy with an appropriate …

Simulation of open quantum dynamics with bootstrap-based long short-term memory recurrent neural network

K Lin, J Peng, FL Gu, Z Lan - The Journal of Physical Chemistry …, 2021 - ACS Publications
The recurrent neural network with the long short-term memory cell (LSTM-NN) is employed
to simulate the long-time dynamics of open quantum systems. The bootstrap method is …

Computer-aided drug design

PV Bharatam - Drug discovery and development: From targets and …, 2021 - Springer
Abstract Computer-Aided Drug Design topic deals with the application of computer
hardware and software to provide solutions at every stage of drug discovery. QSAR methods …

Unique: A framework for uncertainty quantification benchmarking

J Lanini, MTD Huynh, G Scebba… - Journal of chemical …, 2024 - ACS Publications
Machine learning (ML) models have become key in decision-making for many disciplines,
including drug discovery and medicinal chemistry. ML models are generally evaluated prior …

Privacy-preserving outsourced support vector machine design for secure drug discovery

X Liu, RH Deng, KKR Choo… - IEEE Transactions on …, 2018 - ieeexplore.ieee.org
In this paper, we propose a framework for privacy-preserving outsourced drug discovery in
the cloud, which we refer to as POD. Specifically, POD is designed to allow the cloud to …

Machine learning-based mobile applications using Python and Scikit-Learn

SK Rajamani, RS Iyer - Designing and develo** innovative mobile …, 2023 - igi-global.com
This chapter gives a broad outline of machine learning on Android mobile phones using the
Scikit-learn module. The first section introduces the reader to Python language; next, Python …

Cancer classification using a novel gene selection approach by means of shuffling based on data clustering with optimization

V Elyasigomari, MS Mirjafari, HRC Screen… - Applied Soft …, 2015 - Elsevier
This research presents an innovative method for cancer identification and type classification
using microarray data. The method is based on gene selection with shuffling in association …