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The diverse roles of DNA methylation in mammalian development and disease
DNA methylation is of paramount importance for mammalian embryonic development. DNA
methylation has numerous functions: it is implicated in the repression of transposons and …
methylation has numerous functions: it is implicated in the repression of transposons and …
Functional long non-coding RNAs evolve from junk transcripts
Transcriptome studies reveal pervasive transcription of complex genomes, such as those of
mammals. Despite popular arguments for functionality of most, if not all, of these transcripts …
mammals. Despite popular arguments for functionality of most, if not all, of these transcripts …
The code and beyond: transcription regulation by the RNA polymerase II carboxy-terminal domain
The carboxy-terminal domain (CTD) extends from the largest subunit of RNA polymerase II
(Pol II) as a long, repetitive and largely unstructured polypeptide chain. Throughout the …
(Pol II) as a long, repetitive and largely unstructured polypeptide chain. Throughout the …
Prediction of histone post-translational modification patterns based on nascent transcription data
Z Wang, AG Chivu, LA Choate, EJ Rice, DC Miller… - Nature …, 2022 - nature.com
The role of histone modifications in transcription remains incompletely understood. Here, we
examine the relationship between histone modifications and transcription using …
examine the relationship between histone modifications and transcription using …
[HTML][HTML] RNA polymerase II dynamics and mRNA stability feedback scale mRNA amounts with cell size
A fundamental feature of cellular growth is that total protein and RNA amounts increase with
cell size to keep concentrations approximately constant. A key component of this is that …
cell size to keep concentrations approximately constant. A key component of this is that …
[HTML][HTML] Navigating the DNA methylation landscape of cancer
A Nishiyama, M Nakanishi - Trends in Genetics, 2021 - cell.com
DNA methylation is a chemical modification that defines cell type and lineage through the
control of gene expression and genome stability. Disruption of DNA methylation control …
control of gene expression and genome stability. Disruption of DNA methylation control …
Post-translational modifications of histones that influence nucleosome dynamics
GD Bowman, MG Poirier - Chemical reviews, 2014 - ACS Publications
Nucleosomes are efficient DNA-packaging units. The fundamental protein unit of the
nucleosome is the histone dimer, a simple α-helical domain possessing a highly basic …
nucleosome is the histone dimer, a simple α-helical domain possessing a highly basic …
Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation
DNA methylation is an epigenetic modification associated with transcriptional repression of
promoters and is essential for mammalian development. Establishment of DNA methylation …
promoters and is essential for mammalian development. Establishment of DNA methylation …
CDK9: a comprehensive review of its biology, and its role as a potential target for anti-cancer agents
Cyclin-dependent kinases (CDKs) are proteins pivotal to a wide range of cellular functions,
most importantly cell division and transcription, and their dysregulations have been …
most importantly cell division and transcription, and their dysregulations have been …
Gene regulation by the act of long non-coding RNA transcription
Long non-protein-coding RNAs (lncRNAs) are proposed to be the largest transcript class in
the mouse and human transcriptomes. Two important questions are whether all lncRNAs are …
the mouse and human transcriptomes. Two important questions are whether all lncRNAs are …