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Refactoring transcription factors for metabolic engineering
C Deng, Y Wu, X Lv, J Li, Y Liu, G Du, J Chen… - Biotechnology …, 2022 - Elsevier
Due to the ability to regulate target metabolic pathways globally and dynamically, metabolic
regulation systems composed of transcription factors have been widely used in metabolic …
regulation systems composed of transcription factors have been widely used in metabolic …
Redefining fundamental concepts of transcription initiation in bacteria
Despite enormous progress in understanding the fundamentals of bacterial gene regulation,
our knowledge remains limited when compared with the number of bacterial genomes and …
our knowledge remains limited when compared with the number of bacterial genomes and …
Advances in promoter engineering: novel applications and predefined transcriptional control
AP Cazier, J Blazeck - Biotechnology Journal, 2021 - Wiley Online Library
Synthetic biology continues to progress by relying on more robust tools for transcriptional
control, of which promoters are the most fundamental component. Numerous studies have …
control, of which promoters are the most fundamental component. Numerous studies have …
RNAs as sensors of oxidative stress in bacteria
R Buchser, P Sweet, A Anantharaman… - Annual Review of …, 2023 - annualreviews.org
Oxidative stress is an important and pervasive physical stress encountered by all kingdoms
of life, including bacteria. In this review, we briefly describe the nature of oxidative stress …
of life, including bacteria. In this review, we briefly describe the nature of oxidative stress …
Structure and molecular mechanism of bacterial transcription activation
Transcription activation is an important checkpoint of regulation of gene expression which
occurs in response to different intracellular and extracellular signals. The key elements in …
occurs in response to different intracellular and extracellular signals. The key elements in …
Transcription of bacterial chromatin
BA Shen, R Landick - Journal of molecular biology, 2019 - Elsevier
Decades of research have probed the interplay between chromatin (genomic DNA
associated with proteins and RNAs) and transcription by RNA polymerase (RNAP) in all …
associated with proteins and RNAs) and transcription by RNA polymerase (RNAP) in all …
CueR activates transcription through a DNA distortion mechanism
C Fang, SJ Philips, X Wu, K Chen, J Shi, L Shen… - Nature chemical …, 2021 - nature.com
The MerR-family transcription factors (TFs) are a large group of bacterial proteins
responding to cellular metal ions and multiple antibiotics by binding within central RNA …
responding to cellular metal ions and multiple antibiotics by binding within central RNA …
Transcription activation in Escherichia coli and Salmonella
Promoter-specific activation of transcript initiation provides an important regulatory device in
Escherichia coli and Salmonella. Here, we describe the different mechanisms that operate …
Escherichia coli and Salmonella. Here, we describe the different mechanisms that operate …
Genomic footprinting uncovers global transcription factor responses to amino acids in Escherichia coli
Our knowledge of transcriptional responses to changes in nutrient availability comes
primarily from few well-studied transcription factors (TFs), often lacking an unbiased genome …
primarily from few well-studied transcription factors (TFs), often lacking an unbiased genome …
Bacterial MerR family transcription regulators: activationby distortion: The mechanism of transcription regulation by MerR
C Fang, Y Zhang - Acta Biochimica et Biophysica Sinica, 2021 - pmc.ncbi.nlm.nih.gov
Transcription factors (TFs) modulate gene expression by regulating the accessibility of
promoter DNA to RNA polymerases (RNAPs) in bacteria. The MerR family TFs are a large …
promoter DNA to RNA polymerases (RNAPs) in bacteria. The MerR family TFs are a large …