Polymer translocation: the first two decades and the recent diversification
Probably no other field of statistical physics at the borderline of soft matter and biological
physics has caused such a flurry of papers as polymer translocation since the 1994 …
physics has caused such a flurry of papers as polymer translocation since the 1994 …
Polymer translocation and nanopore sequencing: a review of advances and challenges
Various biological processes involve the translocation of macromolecules across
nanopores; these pores are basically protein channels embedded in membranes …
nanopores; these pores are basically protein channels embedded in membranes …
Single-polymer dynamics under constraints: scaling theory and computer experiment
A Milchev - Journal of Physics: Condensed Matter, 2011 - iopscience.iop.org
The relaxation, diffusion and translocation dynamics of single linear polymer chains in
confinement is briefly reviewed with emphasis on the comparison between theoretical …
confinement is briefly reviewed with emphasis on the comparison between theoretical …
Influence of polymer-pore interactions on translocation
We investigate the influence of polymer-pore interactions on the translocation dynamics
using Langevin dynamics simulations. An attractive interaction can greatly improve the …
using Langevin dynamics simulations. An attractive interaction can greatly improve the …
Nanopore sensing: A physical-chemical approach
Protein nanopores have emerged as an important class of sensors for the understanding of
biophysical processes, such as molecular transport across membranes, and for the …
biophysical processes, such as molecular transport across membranes, and for the …
Unifying model of driven polymer translocation
We present a Brownian dynamics model of driven polymer translocation, in which
nonequilibrium memory effects arising from tension propagation (TP) along the cis side …
nonequilibrium memory effects arising from tension propagation (TP) along the cis side …
Sequence dependence of DNA translocation through a nanopore
We investigate the dynamics of DNA translocation through a nanopore using 2D Langevin
dynamics simulations, focusing on the dependence of the translocation dynamics on the …
dynamics simulations, focusing on the dependence of the translocation dynamics on the …
Modeling the separation of macromolecules: A review of current computer simulation methods
Abstract Theory and numerical simulations play a major role in the development of improved
and novel separation methods. In some cases, computer simulations predict counterintuitive …
and novel separation methods. In some cases, computer simulations predict counterintuitive …
Force-driven polymer translocation through a nanopore: An old problem revisited
We consider DNA translocation through a pore in a planar membrane. The pore is so narrow
that only one DNA segment can fit in. Assuming that the biasing force f acts inside the pore …
that only one DNA segment can fit in. Assuming that the biasing force f acts inside the pore …
Influence of non-universal effects on dynamical scaling in driven polymer translocation
We study the dynamics of driven polymer translocation using both molecular dynamics (MD)
simulations and a theoretical model based on the non-equilibrium tension propagation on …
simulations and a theoretical model based on the non-equilibrium tension propagation on …