R-mixup: Riemannian mixup for biological networks

X Kan, Z Li, H Cui, Y Yu, R Xu, S Yu, Z Zhang… - Proceedings of the 29th …, 2023 - dl.acm.org
Biological networks are commonly used in biomedical and healthcare domains to effectively
model the structure of complex biological systems with interactions linking biological entities …

Cf-gode: Continuous-time causal inference for multi-agent dynamical systems

S Jiang, Z Huang, X Luo, Y Sun - Proceedings of the 29th ACM SIGKDD …, 2023 - dl.acm.org
Multi-agent dynamical systems refer to scenarios where multiple units (aka agents) interact
with each other and evolve collectively over time. For instance, people's health conditions …

Ptgb: Pre-train graph neural networks for brain network analysis

Y Yang, H Cui, C Yang - arxiv preprint arxiv:2305.14376, 2023 - arxiv.org
The human brain is the central hub of the neurobiological system, controlling behavior and
cognition in complex ways. Recent advances in neuroscience and neuroimaging analysis …

Dynamic brain transformer with multi-level attention for functional brain network analysis

X Kan, AAC Gu, H Cui, Y Guo… - 2023 IEEE EMBS …, 2023 - ieeexplore.ieee.org
Recent neuroimaging studies have highlighted the importance of network-centric brain
analysis, particularly with functional magnetic resonance imaging. The emergence of Deep …

Transformer-based hierarchical clustering for brain network analysis

W Dai, H Cui, X Kan, Y Guo… - 2023 IEEE 20th …, 2023 - ieeexplore.ieee.org
Brain networks, graphical models such as those constructed from MRI, have been widely
used in pathological prediction and analysis of brain functions. Within the complex brain …

Multi-view brain network analysis with cross-view missing network generation

G Luo, C Li, H Cui, L Sun, L He… - 2022 IEEE International …, 2022 - ieeexplore.ieee.org
Parkinson's Disease (PD), one of the most common neurological disorders, has long been a
challenge in public health clinical diagnosis as well as scientific understanding. Recently …

Contrastive Graph Pooling for Explainable Classification of Brain Networks

J Xu, Q Bian, X Li, A Zhang, Y Ke… - … on Medical Imaging, 2024 - ieeexplore.ieee.org
Functional magnetic resonance imaging (fMRI) is a commonly used technique to measure
neural activation. Its application has been particularly important in identifying underlying …

Towards Data-centric Machine Learning on Directed Graphs: a Survey

H Sun, X Li, D Su, J Han, RH Li, G Wang - arxiv preprint arxiv:2412.01849, 2024 - arxiv.org
In recent years, Graph Neural Networks (GNNs) have made significant advances in
processing structured data. However, most of them primarily adopted a model-centric …

[HTML][HTML] Discovering the effective connectome of the brain with dynamic Bayesian DAG learning

A Bagheri, M Pasande, K Bello, BN Araabi… - NeuroImage, 2024 - Elsevier
Understanding the complex mechanisms of the brain can be unraveled by extracting the
Dynamic Effective Connectome (DEC). Recently, score-based Directed Acyclic Graph (DAG) …

Fedbrain: Federated training of graph neural networks for connectome-based brain imaging analysis

Y Yang, H **e, H Cui, C Yang - PACIFIC SYMPOSIUM ON …, 2023 - World Scientific
Recent advancements in neuroimaging techniques have sparked a growing interest in
understanding the complex interactions between anatomical regions of interest (ROIs) …