The emerging challenge of FLiRT variants: KP. 1.1 and KP. 2 in the global pandemic landscape

P Kumar, J Jayan, RK Sharma… - … Journal of Medicine, 2024 - academic.oup.com
The SARS-CoV-2 virus has undergone substantial evolution, leading to emergence of new
FLiRT variants characterized by specific spike mutations—F to L at position 456 and R to T …

Wastewater surveillance for viral pathogens: a tool for public health

MC Dos Santos, ACC Silva, C dos Reis Teixeira… - Heliyon, 2024 - cell.com
A focus on water quality has intensified globally, considering its critical role in sustaining life
and ecosystems. Wastewater, reflecting societal development, profoundly impacts public …

Genomic surveillance reveals early detection and transition of delta to omicron lineages of SARS-CoV-2 variants in wastewater treatment plants of Pune, India

V Rajput, R Pramanik, V Malik, R Yadav… - … Science and Pollution …, 2023 - Springer
The COVID-19 pandemic has emphasized the urgency for rapid public health surveillance
methods to detect and monitor the transmission of infectious diseases. The wastewater …

Tracking the time lag between SARS-CoV-2 wastewater concentrations and three COVID-19 clinical metrics: a 21-month case study in the Tricounty Detroit area …

L Zhao, RA Faust, RE David, J Norton… - Journal of …, 2024 - ascelibrary.org
Wastewater surveillance has been widely implemented to monitor COVID-19 incidences in
communities worldwide. One notable application of wastewater surveillance is for providing …

Hyperplex PCR enables highly multiplexed analysis of point mutations in wastewater: Long-term SARS-CoV-2 variant surveillance in Sweden as a case study

RRG Soares, JE Varg, A Szabó, M Kluge, F Petrini… - Water Research, 2025 - Elsevier
Wastewater-based surveillance (WBS) allows the analysis of pathogens, chemicals or other
biomarkers in wastewater to derive unbiased epidemiological information at population …

Co-occurrence of SARS-CoV-2 variants in rivers and sewage in India and Brazil

C Thompson, CV Leal, R da Silva Faustino… - Science of The Total …, 2025 - Elsevier
The genomic monitoring of SARS-CoV-2 variants of concern (VOCs) in riverine and sewage
water has been widely used as an epidemiological tool worldwide. But its utility for …

Wastewater-based SARS-CoV-2 surveillance and sequencing

A Michie - Microbiology Australia, 2024 - CSIRO Publishing
Though most often associated with poliovirus surveillance, wastewater-based surveillance
(WBS) can be employed for viruses shed in human excreta (faeces, urine, skin, sputum …

[HTML][HTML] Revealing patterns of SARS-CoV-2 variant emergence and evolution using RBD amplicon sequencing of wastewater

X Chen, J Balliew, CX Bauer, J Deegan, A Gitter… - Journal of Infection, 2024 - Elsevier
Objectives Rapid evolution of SARS-CoV-2 has resulted in the emergence of numerous
variants, posing significant challenges to public health surveillance. Clinical genome …

[HTML][HTML] Early Introductions of Candida auris Detected by Wastewater Surveillance, Utah, USA, 2022–2023

J Chavez, K Crank, C Barber, D Gerrity… - Emerging Infectious …, 2024 - pmc.ncbi.nlm.nih.gov
Candida auris is considered a nosocomial pathogen of high concern and is currently
spreading across the United States. Infection control measures for C. auris focus mainly on …

Detection of Omicron variant in November 2021: a retrospective analysis through wastewater in Halifax, Canada

EK Hayes, C Sweeney, AK Stoddart… - … : Water Research & …, 2025 - pubs.rsc.org
This study evaluates the efficacy of wastewater surveillance (WWS) for the early detection of
the Omicron variant of SARS-CoV-2 in a university setting in Halifax, Canada. Utilizing an …