Crowding of molecular motors determines microtubule depolymerization

L Reese, A Melbinger, E Frey - Biophysical journal, 2011 - cell.com
The assembly and disassembly dynamics of microtubules (MTs) is tightly controlled by MT-
associated proteins. Here, we investigate how plus-end-directed depolymerases of the …

Tau induces cooperative Taxol binding to microtubules

JL Ross, CD Santangelo, V Makrides… - Proceedings of the …, 2004 - pnas.org
Taxol and tau are two ligands that stabilize the microtubule (MT) lattice. Taxol is an anti-
mitotic drug that binds β tubulin in the MT interior. Tau is a MT-associated protein that binds …

Dynamic kinesin-1 clustering on microtubules due to mutually attractive interactions

WH Roos, O Campas, F Montel, G Woehlke… - Physical …, 2008 - iopscience.iop.org
Molecular motors often work collectively inside the cell. While the properties of individual
motors have been extensively studied over the last decade, much less is known on how …

Cooperative ligand binding to a double-stranded Ising lattice—Application to cofilin binding to actin filaments

W Cao, EW Taylor, EM De La Cruz - PNAS nexus, 2023 - academic.oup.com
Cooperative ligand binding to linear polymers is fundamental in many scientific disciplines,
particularly biological and chemical physics and engineering. Such ligand binding …

Orientational correlations and the effect of spatial gradients in the equilibrium steady state of hard rods in two dimensions: A study using deposition-evaporation …

MD Khandkar, M Barma - Physical Review E—Statistical, Nonlinear, and Soft …, 2005 - APS
Deposition and evaporation of infinitely thin hard rods (needles) is studied in two
dimensions using Monte Carlo simulations. The ratio of deposition to evaporation rates …

Effects of the chemomechanical step** cycle on the traffic of molecular motors

S Klumpp, Y Chai, R Lipowsky - Physical Review E—Statistical, Nonlinear, and …, 2008 - APS
We discuss effects of the step** kinetics of molecular motors on their traffic behavior on
crowded filaments using a simple two-state chemomechanical cycle. While the general …

Collective phenomena in intracellular processes

E Frey, A Parmeggiani, T Franosch - Genome Informatics, 2004 - jstage.jst.go.jp
Intracellular transport and cytoskeletal organization are the result of an interaction between
elastic filaments and force generation by motor proteins. The observed phenomena are still …

Kinetic Study of the Oxidation of [Ru(NH3)5pz]2+ by [Co(C2O4)3]3- in AOT−Oil−Water Microemulsions and in CTACl Micellar Solutions

R De la Vega, P Perez-Tejeda, P Lopez-Cornejo… - Langmuir, 2004 - ACS Publications
The kinetics of the electron-transfer reaction between pentaaminepyrazine ruthenium (II),[Ru
(NH3) 5pz] 2+, and trisoxalatecobaltate (III),[Co (C2O4) 3] 3-, was studied in sodium bis (2 …

[HTML][HTML] Adsorption kinetics and thermodynamic properties of a binary mixture of hard-core particles on a square lattice

S Darjani, J Koplik, V Pauchard… - The Journal of Chemical …, 2021 - pubs.aip.org
The adsorption kinetics and thermodynamic properties of a binary mixture on a square
lattice are studied using the random sequential adsorption with surface diffusion (RSAD) …

Glassy dynamics and equilibrium state on the honeycomb lattice: Role of surface diffusion and desorption on surface crowding

S Darjani, J Koplik, V Pauchard, S Banerjee - Physical Review E, 2021 - APS
The phase behavior and adsorption kinetics of hard-core particles on a honeycomb lattice
are studied by means of random sequential adsorption with surface diffusion. We …