Evolution of gene duplication in plants
Ancient duplication events and a high rate of retention of extant pairs of duplicate genes
have contributed to an abundance of duplicate genes in plant genomes. These duplicates …
have contributed to an abundance of duplicate genes in plant genomes. These duplicates …
Abscisic acid: emergence of a core signaling network
Abscisic acid (ABA) regulates numerous developmental processes and adaptive stress
responses in plants. Many ABA signaling components have been identified, but their …
responses in plants. Many ABA signaling components have been identified, but their …
One thousand plant transcriptomes and the phylogenomics of green plants
Nature, 2019 - nature.com
Green plants (Viridiplantae) include around 450,000–500,000 species, of great diversity and
have important roles in terrestrial and aquatic ecosystems. Here, as part of the One …
have important roles in terrestrial and aquatic ecosystems. Here, as part of the One …
Insights into land plant evolution garnered from the Marchantia polymorpha genome
The evolution of land flora transformed the terrestrial environment. Land plants evolved from
an ancestral charophycean alga from which they inherited developmental, biochemical, and …
an ancestral charophycean alga from which they inherited developmental, biochemical, and …
Phytozome: a comparative platform for green plant genomics
DM Goodstein, S Shu, R Howson… - Nucleic acids …, 2012 - academic.oup.com
The number of sequenced plant genomes and associated genomic resources is growing
rapidly with the advent of both an increased focus on plant genomics from funding agencies …
rapidly with the advent of both an increased focus on plant genomics from funding agencies …
LTR_retriever: a highly accurate and sensitive program for identification of long terminal repeat retrotransposons
Long terminal repeat retrotransposons (LTR-RTs) are prevalent in plant genomes. The
identification of LTR-RTs is critical for achieving high-quality gene annotation. Based on the …
identification of LTR-RTs is critical for achieving high-quality gene annotation. Based on the …
WRKY transcription factors
WRKY transcription factors are one of the largest families of transcriptional regulators in
plants and form integral parts of signalling webs that modulate many plant processes. Here …
plants and form integral parts of signalling webs that modulate many plant processes. Here …
Ancestral polyploidy in seed plants and angiosperms
Abstract Whole-genome duplication (WGD), or polyploidy, followed by gene loss and
diploidization has long been recognized as an important evolutionary force in animals, fungi …
diploidization has long been recognized as an important evolutionary force in animals, fungi …
Ethylene signaling in plants
BM Binder - Journal of Biological Chemistry, 2020 - ASBMB
Ethylene is a gaseous phytohormone and the first of this hormone class to be discovered. It
is the simplest olefin gas and is biosynthesized by plants to regulate plant development …
is the simplest olefin gas and is biosynthesized by plants to regulate plant development …
Plant evolution driven by interactions with symbiotic and pathogenic microbes
BACKGROUND Microbial interactions have shaped plant diversity in terrestrial ecosystems.
By forming mutually beneficial symbioses, microbes helped plants colonize land more than …
By forming mutually beneficial symbioses, microbes helped plants colonize land more than …