Chirality-dependent growth of self-assembled diphenylalanine microtubes

PS Zelenovskiy, AS Nuraeva, S Kopyl… - Crystal Growth & …, 2019 - ACS Publications
The difference in the crystal structure and growth kinetics of microtubes formed from l-and d-
enantiomers of diphenylalanine dipeptide is investigated both experimentally and …

Molecular self-assembled helix peptide nanotubes based on some amino acid molecules and their dipeptides: molecular modeling studies

VS Bystrov - Journal of Molecular Modeling, 2024 - Springer
Context The paper considers the features of the structure and dipole moments of several
amino acids and their dipeptides which play an important role in the formation of the peptide …

Modeling of supramolecular biopolymers: Leading the in silico revolution of tissue engineering and nanomedicine

F Fontana, F Gelain - Nanotechnology Reviews, 2022 - degruyter.com
The field of tissue engineering is poised to be positively influenced by the advent of
supramolecular biopolymers, because of their promising tailorability coming from the bottom …

Pharmaceutical formulation and characterization of dipeptide nanotubes for drug delivery applications

SL Porter, SM Coulter, S Pentlavalli… - Macromolecular …, 2020 - Wiley Online Library
Peptide nanotubes are promising materials for a variety of biomedical applications with
ultrashort (≤ 7 amino acids) forms providing particular promise for clinical translation. The …

Structures and properties of the self-assembling diphenylalanine peptide nanotubes containing water molecules: Modeling and data analysis

V Bystrov, J Coutinho, P Zelenovskiy, A Nuraeva… - Nanomaterials, 2020 - mdpi.com
The structures and properties of the diphenylalanine (FF) peptide nanotubes (PNTs), both L-
chiral and D-chiral (L-FF and D-FF) and empty and filled with water/ice clusters, are …

Quantitative assessment of chirality of protein secondary structures and phenylalanine peptide nanotubes

A Sidorova, V Bystrov, A Lutsenko, D Shpigun… - Nanomaterials, 2021 - mdpi.com
In this study we consider the features of spatial-structure formation in proteins and their
application in bioengineering. Methods for the quantitative assessment of the chirality of …

Chiral dualism as an instrument of hierarchical structure formation in molecular biology

VA Tverdislov, EV Malyshko - Symmetry, 2020 - mdpi.com
The origin of chiral asymmetry in biology has attracted the attention of the research
community throughout the years. In this paper we discuss the role of chirality and chirality …

Modeling of self-assembled peptide nanotubes and determination of their chirality sign based on dipole moment calculations

V Bystrov, A Sidorova, A Lutsenko, D Shpigun… - Nanomaterials, 2021 - mdpi.com
The chirality quantification is of great importance in structural biology, where the differences
in proteins twisting can provide essentially different physiological effects. However, this …

Molecular modelling and computational studies of peptide diphenylalanine nanotubes, containing waters: structural and interactions analysis

VS Bystrov, SV Filippov - Journal of Molecular Modeling, 2022 - Springer
The work is devoted to computer studies of the structural and physical properties of such self-
organizing structures as peptide nanotubes (PNT) based on diphenylalanine (FF) dipeptide …

Chiral peculiar properties of self-organization of diphenylalanine peptide nanotubes: Modeling of structure and properties

VS Bystrov, PS Zelenovskiy, AS Nuraeva, S Kopyl… - 2019 - elar.urfu.ru
The structure and properties of diphenylalanine peptide nanotubes based on phenylalanine
were investigated by various molecular modeling methods. The main approaches were semi …