Cytonuclear integration and co-evolution

DB Sloan, JM Warren, AM Williams, Z Wu… - Nature Reviews …, 2018 - nature.com
The partitioning of genetic material between the nucleus and cytoplasmic (mitochondrial and
plastid) genomes within eukaryotic cells necessitates coordinated integration between these …

Spatial features and functional implications of plant 3D genome organization

K Domb, N Wang, G Hummel… - Annual Review of Plant …, 2022 - annualreviews.org
The advent of high-throughput sequencing-based methods for chromatin conformation,
accessibility, and immunoprecipitation assays has been a turning point in 3D genomics …

Neoproterozoic origin and multiple transitions to macroscopic growth in green seaweeds

A Del Cortona, CJ Jackson… - Proceedings of the …, 2020 - National Acad Sciences
The Neoproterozoic Era records the transition from a largely bacterial to a predominantly
eukaryotic phototrophic world, creating the foundation for the complex benthic ecosystems …

Phylotranscriptomic insights into a Mesoproterozoic–Neoproterozoic origin and early radiation of green seaweeds (Ulvophyceae)

Z Hou, X Ma, X Shi, X Li, L Yang, S **ao… - Nature …, 2022 - nature.com
The Ulvophyceae, a major group of green algae, is of particular evolutionary interest
because of its remarkable morphological and ecological diversity. Its phylogenetic …

Origin of minicircular mitochondrial genomes in red algae

Y Lee, CH Cho, C Noh, JH Yang, SI Park… - Nature …, 2023 - nature.com
Eukaryotic organelle genomes are generally of conserved size and gene content within
phylogenetic groups. However, significant variation in genome structure may occur. Here …

Plastid phylogenomics with broad taxon sampling further elucidates the distinct evolutionary origins and timing of secondary green plastids

C Jackson, AH Knoll, CX Chan, H Verbruggen - Scientific Reports, 2018 - nature.com
Secondary plastids derived from green algae occur in chlorarachniophytes, photosynthetic
euglenophytes, and the dinoflagellate genus Lepidodinium. Recent advances in …

Novel genetic code and record-setting AT-richness in the highly reduced plastid genome of the holoparasitic plant Balanophora

HJ Su, TJ Barkman, W Hao, SS Jones… - Proceedings of the …, 2019 - National Acad Sciences
Plastid genomes (plastomes) vary enormously in size and gene content among the many
lineages of nonphotosynthetic plants, but key lineages remain unexplored. We therefore …

Extreme variation in rates of evolution in the plastid Clp protease complex

AM Williams, G Friso, KJ van Wijk… - The Plant Journal, 2019 - Wiley Online Library
Eukaryotic cells represent an intricate collaboration between multiple genomes, even down
to the level of multi‐subunit complexes in mitochondria and plastids. One such complex in …

Marine macroalgal biodiversity of northern Madagascar: morpho-genetic systematics and implications of anthropic impacts for conservation

C Vieira, A De Ramon N'Yeurt… - Biodiversity and …, 2021 - Springer
A floristic survey of the marine algal biodiversity of Antsiranana Bay, northern Madagascar,
was conducted during November 2018. This represents the first inventory encompassing the …

The evolution of extremely diverged plastomes in Selaginellaceae (lycophyte) is driven by repeat patterns and the underlying DNA maintenance machinery

QP **ang, JY Tang, JG Yu, DR Smith, YM Zhu… - The Plant …, 2022 - Wiley Online Library
Two factors are proposed to account for the unusual features of organellar genomes: the
disruptions of organelle‐targeted DNA replication, repair, and recombination (DNA‐RRR) …