Engineering structural variants to interrogate genome function

J Koeppel, J Weller, T Vanderstichele, L Parts - Nature Genetics, 2024 - nature.com
Structural variation, such as deletions, duplications, inversions and complex
rearrangements, can have profound effects on gene expression, genome stability …

[HTML][HTML] Functional restoration of a CFTR splicing mutation through RNA delivery of CRISPR adenine base editor

S Amistadi, G Maule, M Ciciani, MM Ensinck… - Molecular Therapy, 2023 - cell.com
Cystic fibrosis (CF) is a genetic disease caused by mutations in the CF transmembrane
conductance regulator (CFTR) gene. The 2789+ 5G> A CFTR mutation is a quite frequent …

Multiplex generation and single-cell analysis of structural variants in mammalian genomes

S **lay, JB Lalanne, RM Daza, S Kottapalli… - Science, 2025 - science.org
Studying the functional consequences of structural variants (SVs) in mammalian genomes is
challenging because (i) SVs arise much less commonly than single-nucleotide variants or …

Randomizing the human genome by engineering recombination between repeat elements

J Koeppel, R Ferreira, T Vanderstichele, LM Riedmayr… - Science, 2025 - science.org
We lack tools to edit DNA sequences at scales necessary to study 99% of the human
genome that is noncoding. To address this gap, we applied CRISPR prime editing to insert …

Rapid human genomic DNA cloning into mouse artificial chromosome via direct chromosome transfer from human iPSC and CRISPR/Cas9-mediated translocation

H Miyamoto, H Kobayashi, N Kishima… - Nucleic Acids …, 2024 - academic.oup.com
A 'genomically'humanized animal stably maintains and functionally expresses the genes on
human chromosome fragment (hCF;< 24 Mb) loaded onto mouse artificial chromosome …

[HTML][HTML] Applications of CRISPR technologies to the development of gene and cell therapy

CS Park, O Habib, Y Lee, JK Hur - BMB reports, 2024 - ncbi.nlm.nih.gov
Advancements in gene and cell therapy have resulted in novel therapeutics for diseases
previously considered incurable or challenging to treat. Among the various contributing …

CRISPR/Cas9 Gene Editing System Can Alter Gene Expression and Induce DNA Damage Accumulation

L Yang, H Li, Y Han, Y Song, M Wei, M Fang, Y Sun - Genes, 2023 - mdpi.com
Clustered regularly interspaced short palindromic repeats (CRISPR) and the associated
protein (Cas) gene editing can induce P53 activation, large genome fragment deletions, and …

Beyond precision: evaluation of off-target clustered regularly interspaced short palindromic repeats/Cas9–mediated genome editing

I Peña-Gutiérrez, B Olalla-Sastre, P Río… - Cytotherapy, 2024 - Elsevier
The gene editing field has advanced rapidly since the development of the clustered
regularly interspaced short palindromic repeats (CRISPR)/Cas9 system because of its …

Establishment of a Cleavage-Based Single-Plasmid Dual-Luciferase Surrogate Reporter for the Cleavage Efficiency Evaluation of CRISPR-Cas12a Systems and Its …

Y Shi, Q Tan, C Yang, S Li, Y Li, B He, H **e… - The CRISPR …, 2024 - liebertpub.com
CRISPR-Cas technology is a widely utilized gene-editing tool that involves gRNA-guided
sequence recognition and Cas nuclease-mediated cleavage. The design and evaluation of …

[PDF][PDF] Genetic Editing with CRISPR Cas9: recent Biomedical and Biotechnological Applications

FAG Posse, AKP Peña… - Universitas …, 2024 - revistas.javeriana.edu.co
The use of a novel and powerful technology that allows for the precise editing of the genetic
material of various organisms is becoming widespread. This technology derives from …