The new tree of eukaryotes

F Burki, AJ Roger, MW Brown, AGB Simpson - Trends in ecology & …, 2020 - cell.com
For 15 years, the eukaryote Tree of Life (eToL) has been divided into five to eight major
grou**s, known as 'supergroups'. However, the tree has been profoundly rearranged …

Horizontal gene transfer in eukaryotes: not if, but how much?

J Van Etten, D Bhattacharya - Trends in Genetics, 2020 - cell.com
Horizontal gene transfer (HGT), the movement of genetic material across branches of the
tree of life, is well established in prokaryotes and uncontroversial. This is explained in part …

A molecular timescale for eukaryote evolution with implications for the origin of red algal-derived plastids

JFH Strassert, I Irisarri, TA Williams, F Burki - Nature Communications, 2021 - nature.com
In modern oceans, eukaryotic phytoplankton is dominated by lineages with red algal-derived
plastids such as diatoms, dinoflagellates, and coccolithophores. Despite the ecological …

[HTML][HTML] Divergent genomic trajectories predate the origin of animals and fungi

E Ocaña-Pallarès, TA Williams, D López-Escardó… - Nature, 2022 - nature.com
Animals and fungi have radically distinct morphologies, yet both evolved within the same
eukaryotic supergroup: Opisthokonta,. Here we reconstructed the trajectory of genetic …

Microbial predators form a new supergroup of eukaryotes

DV Tikhonenkov, KV Mikhailov, RMR Gawryluk… - Nature, 2022 - nature.com
Molecular phylogenetics of microbial eukaryotes has reshaped the tree of life by
establishing broad taxonomic divisions, termed supergroups, that supersede the traditional …

[HTML][HTML] EukProt: a database of genome-scale predicted proteins across the diversity of eukaryotes

DJ Richter, C Berney, JFH Strassert… - Peer Community …, 2022 - peercommunityjournal.org
EukProt is a database of published and publicly available predicted protein sets selected to
represent the breadth of eukaryotic diversity, currently including 993 species from all major …

The lipid metabolism in thraustochytrids

C Morabito, C Bournaud, C Maës, M Schuler… - Progress in Lipid …, 2019 - Elsevier
Thraustochytrids are unicellular heterotrophic marine protists of the Stramenopile group,
often considered as non-photosynthetic microalgae. They have been isolated from a wide …

Progress towards the tree of eukaryotes

PJ Keeling, F Burki - Current Biology, 2019 - cell.com
Develo** a detailed understanding of how all known forms of life are related to one
another in the tree of life has been a major preoccupation of biology since the idea of tree …

PhyloFisher: a phylogenomic package for resolving eukaryotic relationships

AK Tice, D Žihala, T Pánek, RE Jones… - PLoS …, 2021 - journals.plos.org
Phylogenomic analyses of hundreds of protein-coding genes aimed at resolving
phylogenetic relationships is now a common practice. However, no software currently exists …

Phylogenomic insights into the early diversification of fungi

JFH Strassert, MT Monaghan - Current Biology, 2022 - cell.com
Phylogenomic analyses have boosted our understanding of the evolutionary trajectories of
all living forms by providing continuous improvements to the tree of life. 1, 2, 3, 4, 5 Within …